BLASTP 2.0.11 [Jan-20-2000] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= sp|P09429|HMG1_HUMAN HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1) - Homo sapiens (Human). (214 letters) Database: sprot.fas 72,615 sequences; 26,335,942 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value P07155;P27109;P27428 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1) (... 326 2e-89 P09429 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1). 326 2e-89 P10103 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1). 326 2e-89 P12682 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1). 324 9e-89 P26583 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). 284 1e-76 P17741 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). 283 1e-76 P52925 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). 282 3e-76 P30681 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). 279 2e-75 P26584 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). 279 3e-75 P07746 HIGH MOBILITY GROUP-T PROTEIN (HMG-T). 266 2e-71 P07156 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1) (FRAGMENT). 252 4e-67 P40618 HIGH MOBILITY GROUP PROTEIN HMG2A (HMG-2A). 251 8e-67 P36194 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1). 243 2e-64 P40644 HIGH MOBILITY GROUP PROTEIN 1 HOMOLOG. 165 7e-41 Q09390 HYPOTHETICAL 23.8 KD PROTEIN F47D12.4 IN CHROMOSOME III. 131 1e-30 P40673 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2) (FRAGMENT). 83 5e-16 Q08943 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) (RECOMB... 75 8e-14 Q04931 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) (RECOMB... 75 1e-13 Q08945 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) (RECOMB... 73 4e-13 P26586 HIGH MOBILITY GROUP PROTEIN HOMOLOG TDP-1. 69 8e-12 P11632 NONHISTONE CHROMOSOMAL PROTEIN 6A. 68 1e-11 Q04678 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) (RECOMB... 67 2e-11 P27347 DNA-BINDING PROTEIN MNB1B (HMG1-LIKE PROTEIN). 66 4e-11 P11633 NONHISTONE CHROMOSOMAL PROTEIN 6B. 65 1e-10 P40620 HMG1/2-LIKE PROTEIN. 64 2e-10 P40619 HMG1/2-LIKE PROTEIN. 63 3e-10 P40621 HMG1/2-LIKE PROTEIN. 62 1e-09 P41848 PROBABLE STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) 59 5e-09 Q02486 ARS-BINDING FACTOR 2 PRECURSOR. 59 5e-09 Q05344 SINGLE-STRAND RECOGNITION PROTEIN (SSRP) (CHORION-FACTOR... 59 7e-09 P11873 NONHISTONE CHROMOSOMAL PROTEIN LG-1. 59 9e-09 P33417 INTRASTRAND CROSSLINK RECOGNITION PROTEIN (STRUCTURE-SPE... 58 2e-08 P40625 HIGH-MOBILITY-GROUP PROTEIN (NONHISTONE CHROMOSOMAL PROT... 57 3e-08 Q05153 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 HOMOLOG (HMG PR... 56 4e-08 P26585 HMG1/2-LIKE PROTEIN (SB11 PROTEIN). 56 4e-08 P40627 HIGH-MOBILITY-GROUP PROTEIN C (FRAGMENT). 56 4e-08 P40628 HIGH MOBILITY GROUP PROTEIN HOMOLOG. 55 8e-08 P40632 HIGH MOBILITY GROUP PROTEIN HOMOLOG NHP1. 55 1e-07 P25977;P25978 NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDIN... 54 2e-07 P17480 NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING FACTO... 54 2e-07 P25976 NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING FACTO... 53 3e-07 P54277 PMS1 PROTEIN HOMOLOG 1 (DNA MISMATCH REPAIR PROTEIN PMS1). 50 3e-06 P40630 TESTIS-SPECIFIC HIGH MOBILITY GROUP PROTEIN (TS-HMG). 50 3e-06 P40622 MOBILITY GROUP PROTEIN 1A. 50 4e-06 Q00059 MITOCHONDRIAL TRANSCRIPTION FACTOR 1 PRECURSOR (MTTF1). 49 8e-06 P25980 NUCLEOLAR TRANSCRIPTION FACTOR 2 (UPSTREAM BINDING FACTO... 48 2e-05 P25979 NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING FACTO... 48 2e-05 Q03435 NHP10 PROTEIN. 47 2e-05 P40631 MICRONUCLEAR LINKER HISTONE POLYPROTEIN (CONTAINS: LINKE... 47 2e-05 Q06943 HIGH MOBILITY GROUP PROTEIN Z (HMG-Z). 46 5e-05 Q39601 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 HOMOLOG (HMG PR... 46 7e-05 Q05783 HIGH MOBILITY GROUP PROTEIN D (HMG-D). 45 9e-05 P40623 MOBILITY GROUP PROTEIN 1B. 45 1e-04 Q10241 HYPOTHETICAL 26.3 KD PROTEIN C4G9.11C IN CHROMOSOME I. 44 3e-04 P40626 HIGH-MOBILITY-GROUP PROTEIN B. 44 3e-04 O00570 SOX-1 PROTEIN. 41 0.002 P53783 SOX-1 PROTEIN. 40 0.004 P55863 TRANSCRIPTION FACTOR SOX-3. 39 0.005 Q03257 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 39 0.006 Q03255 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 39 0.008 Q27949 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 39 0.008 P54231 TRANSCRIPTION FACTOR SOX-2. 39 0.008 P48432 TRANSCRIPTION FACTOR SOX-2. 39 0.008 P48431;Q14537 TRANSCRIPTION FACTOR SOX-2. 39 0.008 P48430 TRANSCRIPTION FACTOR SOX-2. 39 0.008 P36981 MATING TYPE PROTEIN A-1 (MT A-1) (LOWER CASE "A"). 39 0.008 O09141;O08518 TRANSCRIPTION FACTOR SOX-21 (TRANSCRIPTION FACTOR... 38 0.011 P47792 TRANSCRIPTION FACTOR SOX-19. 38 0.011 Q03256 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 38 0.014 P51501 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 38 0.019 O18896 TRANSCRIPTION FACTOR SOX-9. 38 0.019 P48436 TRANSCRIPTION FACTOR SOX-9. 38 0.019 P48434 TRANSCRIPTION FACTOR SOX-9. 38 0.019 P40645 TRANSCRIPTION FACTOR SOX-6. 38 0.019 P53784 TRANSCRIPTION FACTOR SOX-3. 38 0.019 P41225;P35714 TRANSCRIPTION FACTOR SOX-3. 38 0.019 P48433 TRANSCRIPTION FACTOR SOX-3. 37 0.025 P10840 MATING-TYPE M-SPECIFIC POLYPEPTIDE MC. 37 0.025 P40649 SOX-12 PROTEIN. 37 0.032 Q00417 T-CELL-SPECIFIC TRANSCRIPTION FACTOR 1 (TCF-1) (T-CELL F... 36 0.042 Q06945 TRANSCRIPTION FACTOR SOX-4. 36 0.042 P40637 SRY-RELATED PROTEIN AES1 (FRAGMENT). 36 0.073 P40634 SRY-RELATED PROTEIN ADW2 (FRAGMENT). 36 0.073 Q61473;Q61472 TRANSCRIPTION FACTOR SOX-17. 35 0.095 P36395 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 35 0.095 Q62563 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 35 0.12 Q62565 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 35 0.12 Q06831 TRANSCRIPTION FACTOR SOX-4. 35 0.12 P40639 SRY-RELATED PROTEIN AES4 (FRAGMENT). 35 0.12 Q12766 HYPOTHETICAL PROTEIN KIAA0194 (FRAGMENT). 34 0.16 Q05738 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 34 0.16 Q05066 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 34 0.16 P48046 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 34 0.16 P35710 TRANSCRIPTION FACTOR SOX-5. 34 0.16 P35711 TRANSCRIPTION FACTOR SOX-5. 34 0.16 O15370 SOX-22 PROTEIN. 34 0.21 P43680 TRANSCRIPTION FACTOR SOX-18. 34 0.21 Q04889;O35178 TRANSCRIPTION FACTOR SOX-11. 34 0.21 P35716 TRANSCRIPTION FACTOR SOX-11. 34 0.21 P48435 TRANSCRIPTION FACTOR SOX-11. 34 0.21 P36393 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FAC... 34 0.21 P40655 SRY-RELATED PROTEIN LG28 (FRAGMENT). 34 0.21 P40638 SRY-RELATED PROTEIN AES2 (FRAGMENT). 34 0.21 P40636 SRY-RELATED PROTEIN ADW5 (FRAGMENT). 34 0.21 P40635 SRY-RELATED PROTEIN ADW4 (FRAGMENT). 34 0.21 P40651 SRY-RELATED PROTEIN MG42 (FRAGMENT). 34 0.28 P40654 SRY-RELATED PROTEIN LG27 (FRAGMENT). 34 0.28 P35717 SOX-12 PROTEIN (FRAGMENT). 33 0.37 P25042 ROX1 REPRESSOR (HYPOXIC FUNCTION REPRESSOR) (HEME-DEPEND... 33 0.37 P40665 SRY-RELATED PROTEIN CH1 (FRAGMENT). 33 0.37 Q08696 AXONEME-ASSOCIATED PROTEIN MST101(2). 33 0.48 Q02991 MATING-TYPE PROTEIN MAT-2. 33 0.48 P40652 SRY-RELATED PROTEIN MG43 (FRAGMENT). 32 0.63 P40670 SRY-RELATED PROTEIN CH31 (FRAGMENT). 32 0.63 P40642 SRY-RELATED PROTEIN AMA2 (FRAGMENT). 32 0.63 P40657 SOX-15 PROTEIN (FRAGMENT). 31 1.4 Q04892 SOX-14 PROTEIN (FRAGMENT). 31 1.4 Q00956 COAT PROTEIN. 31 1.4 P40640 SRY-RELATED PROTEIN AES6 (FRAGMENT). 31 1.4 P40656 SOX-14 PROTEIN (FRAGMENT). 31 1.9 P35715 SOX-10 PROTEIN (FRAGMENT). 31 1.9 Q09202 HYPOTHETICAL 25.9 KD PROTEIN AH6.3 IN CHROMOSOME II. 30 3.2 P09208;Q24089;Q24023 INSULIN-LIKE RECEPTOR PRECURSOR (EC 2.7.1.... 30 3.2 Q11102 HYPOTHETICAL 131.5 KD PROTEIN C02F12.7 IN CHROMOSOME X. 29 5.5 P19375 HISTONE H1, EARLY EMBRYONIC. 29 7.2 >P07155;P27109;P27428 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1) (AMPHOTERIN) (HEPARIN-BINDING Length = 214 Score = 326 bits (826), Expect = 2e-89 Identities = 154/168 (91%), Positives = 154/168 (91%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 IGDVAKKLGEMWNNTAADDKQP DIAAYRAKGKPD Sbjct: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPD 168 >P09429 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1). Length = 214 Score = 326 bits (826), Expect = 2e-89 Identities = 154/168 (91%), Positives = 154/168 (91%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 IGDVAKKLGEMWNNTAADDKQP DIAAYRAKGKPD Sbjct: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPD 168 >P10103 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1). Length = 214 Score = 326 bits (826), Expect = 2e-89 Identities = 154/168 (91%), Positives = 154/168 (91%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 IGDVAKKLGEMWNNTAADDKQP DIAAYRAKGKPD Sbjct: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPD 168 >P12682 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1). Length = 214 Score = 324 bits (821), Expect = 9e-89 Identities = 153/168 (91%), Positives = 153/168 (91%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 IGDVAKKLGEMWNNTAADDK P DIAAYRAKGKPD Sbjct: 121 IGDVAKKLGEMWNNTAADDKHPYEKKAAKLKEKYEKDIAAYRAKGKPD 168 >P26583 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). Length = 208 Score = 284 bits (718), Expect = 1e-76 Identities = 132/168 (78%), Positives = 142/168 (83%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 1 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 61 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 IGD AKKLGEMW+ +A DKQP DIAAYRAKGK + Sbjct: 121 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSE 168 >P17741 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). Length = 209 Score = 283 bits (717), Expect = 1e-76 Identities = 132/166 (79%), Positives = 141/166 (84%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 1 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 61 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGK 166 IGD AKKLGEMW+ +A DKQP DIAAYRAKGK Sbjct: 121 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGK 166 >P52925 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). Length = 209 Score = 282 bits (715), Expect = 3e-76 Identities = 131/168 (77%), Positives = 142/168 (83%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 1 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 61 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 IGD AKKLGEMW+ +A DKQP DIAAYRAKGK + Sbjct: 121 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSE 168 >P30681 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). Length = 209 Score = 279 bits (707), Expect = 2e-75 Identities = 131/168 (77%), Positives = 141/168 (82%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 1 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS Sbjct: 61 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 IGD AKKLGEMW+ +A DKQP DIAAYRAKGK + Sbjct: 121 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSE 168 >P26584 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2). Length = 206 Score = 279 bits (706), Expect = 3e-75 Identities = 129/168 (76%), Positives = 140/168 (82%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 1 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 60 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 61 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 120 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 IGD AKKLGEMW+ A DKQP DIAAYRAK K D Sbjct: 121 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSD 168 >P07746 HIGH MOBILITY GROUP-T PROTEIN (HMG-T). Length = 204 Score = 266 bits (674), Expect = 2e-71 Identities = 123/163 (75%), Positives = 137/163 (83%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP+KPRGKMSSYA+FVQT REEHKKKHP+ASVNFSEFSKKCSERWKTMSAKEKGKFED+A Sbjct: 4 DPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLA 63 Query: 64 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGD 123 K DK RYEREM++YIPPKGE KK+FKDPNAPKRP SAFF+FC+++RP++KGE PGLSIGD Sbjct: 64 KLDKVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGD 123 Query: 124 VAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGK 166 VAKKLGE WNN A+DK P DI AYR KGK Sbjct: 124 VAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGK 166 Score = 34.0 bits (76), Expect = 0.21 Identities = 17/54 (31%), Positives = 27/54 (49%), Gaps = 2/54 (3%) Query: 89 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI--GDVAKKLGEMWNNTAADDK 140 KDP P+ S++ F R + K +HP S+ + +KK E W +A +K Sbjct: 3 KDPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEK 56 >P07156 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1) (FRAGMENT). Length = 180 Score = 252 bits (637), Expect = 4e-67 Identities = 120/134 (89%), Positives = 120/134 (89%) Query: 35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP Sbjct: 1 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 60 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXX 154 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP Sbjct: 61 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 120 Query: 155 XXDIAAYRAKGKPD 168 DIAAYRAKGKPD Sbjct: 121 EKDIAAYRAKGKPD 134 Score = 44.5 bits (103), Expect = 1e-04 Identities = 22/74 (29%), Positives = 37/74 (49%), Gaps = 2/74 (2%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ S++ F R + K +HP S+ + +KK E W +A +K +E A Sbjct: 56 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKA 113 Query: 64 KADKARYEREMKTY 77 K +YE+++ Y Sbjct: 114 AKLKEKYEKDIAAY 127 >P40618 HIGH MOBILITY GROUP PROTEIN HMG2A (HMG-2A). Length = 201 Score = 251 bits (634), Expect = 8e-67 Identities = 118/167 (70%), Positives = 135/167 (80%), Gaps = 2/167 (1%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 2 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 61 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KK KDPNAPKRPPSAFFLFCSE+RPKIK +PG+SI Sbjct: 62 MAKADKVRYDREMKDYGPAKGGKKK--KDPNAPKRPPSAFFLFCSEFRPKIKSTNPGISI 119 Query: 122 GDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 GDVAKKLGEMWNN + +KQP D+A Y++KGK D Sbjct: 120 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 166 >P36194 HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1). Length = 200 Score = 243 bits (613), Expect = 2e-64 Identities = 116/167 (69%), Positives = 133/167 (79%), Gaps = 3/167 (1%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKK +P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 2 KGDPKKPKGKMSAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 60 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPS FFLFCSE+RPKIK +PG+SI Sbjct: 61 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 118 Query: 122 GDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKPD 168 GDVAKKLGEMWNN + +KQP D+A Y++KGK D Sbjct: 119 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFD 165 >P40644 HIGH MOBILITY GROUP PROTEIN 1 HOMOLOG. Length = 200 Score = 165 bits (413), Expect = 7e-41 Identities = 81/167 (48%), Positives = 102/167 (60%), Gaps = 3/167 (1%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 D KPRG+MS+YA+FVQ R EH K HP++ V F+EFSK CS RWK + K KG F + + Sbjct: 7 DSSKPRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVFHEKS 66 Query: 64 KADKARYEREMKTYIPPKGETKK---KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DK RY+REM++Y PPKGE K + KDP+APKR SAFF+F E R IK HP S Sbjct: 67 MRDKVRYDREMQSYKPPKGEKNKRRRRRKDPDAPKRNLSAFFIFSGENRAAIKSVHPNWS 126 Query: 121 IGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKP 167 +GD+AK+L W A +K P +A Y+AK KP Sbjct: 127 VGDIAKELAVRWRAMTAGEKIPFDKGAAKDKERYIKAMAEYKAKAKP 173 Score = 49.2 bits (115), Expect = 6e-06 Identities = 29/97 (29%), Positives = 48/97 (48%), Gaps = 2/97 (2%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ +S++ F R K HP+ SV + +K+ + RW+ M+A EK F+ A Sbjct: 96 DPDAPKRNLSAFFIFSGENRAAIKSVHPNWSVG--DIAKELAVRWRAMTAGEKIPFDKGA 153 Query: 64 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSA 100 DK RY + M Y K++ K+ ++ S+ Sbjct: 154 AKDKERYIKAMAEYKAKAKPMKRQVKESSSSSSSDSS 190 >Q09390 HYPOTHETICAL 23.8 KD PROTEIN F47D12.4 IN CHROMOSOME III. Length = 202 Score = 131 bits (326), Expect = 1e-30 Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 4/165 (2%) Query: 4 DPKKP--RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 D KP RGK S Y FFV+ C EEHKKK+P+ +V +E SKKCSE+WKTM EK +F + Sbjct: 8 DMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYE 67 Query: 62 MAKADKARYEREMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 +A+ D RY+ E+ Y K+K KDP+APKR SAFF + + RP+I+ HP Sbjct: 68 LAQKDAERYQAEVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDW 127 Query: 120 SIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAK 164 +G VA++LG+MW + K ++ Y+A+ Sbjct: 128 KVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYKAE 172 Score = 52.3 bits (123), Expect = 7e-07 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S++ F+ Q R E + HPD V + +++ + WK + + K +E Sbjct: 96 KKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKV--GQVAQELGKMWKLVPQETKDMYEQ 153 Query: 62 MAKADKARYEREMKTYIPPKGETKK 86 A+ADK RY EM+ Y K E +K Sbjct: 154 KAQADKDRYADEMRNY---KAEMQK 175 >P40673 HIGH MOBILITY GROUP PROTEIN HMG2 (HMG-2) (FRAGMENT). Length = 38 Score = 82.7 bits (201), Expect = 5e-16 Identities = 36/38 (94%), Positives = 37/38 (96%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFS 38 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPDASVNF+ Sbjct: 1 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDASVNFA 38 >Q08943 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) (RECOMBINATION SIGNAL Length = 708 Score = 75.3 bits (182), Expect = 8e-14 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 5/114 (4%) Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +E+ K E + +A A+ + + K KK Sbjct: 486 EEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMAKDRKSRR-----KSSEAKK 540 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ Sbjct: 541 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKE 594 Score = 61.7 bits (147), Expect = 1e-09 Identities = 31/92 (33%), Positives = 51/92 (54%), Gaps = 2/92 (2%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ A Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDRKA 600 Query: 64 KADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 + + YE+ MK Y +G++ K+ K K Sbjct: 601 EDARREYEKAMKEYEGGRGDSSKRDKSKKKKK 632 >Q04931 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) (RECOMBINATION SIGNAL Length = 561 Score = 74.5 bits (180), Expect = 1e-13 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 5/114 (4%) Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +E+ K + + +A A+ + K K KK Sbjct: 338 EEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRK-----KSSEGKK 392 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ Sbjct: 393 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKE 446 Score = 59.3 bits (141), Expect = 5e-09 Identities = 30/92 (32%), Positives = 49/92 (52%), Gaps = 2/92 (2%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 395 DPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDRKG 452 Query: 64 KADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 + + YE MK Y +G++ K+ K K Sbjct: 453 EDARREYEEAMKEYEGGRGDSSKRDKSKKKKK 484 >Q08945 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) (RECOMBINATION SIGNAL Length = 709 Score = 73.0 bits (176), Expect = 4e-13 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 5/114 (4%) Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +++ K + + KA A+ + K K KK Sbjct: 486 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRK-----KPVEVKK 540 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ Sbjct: 541 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKE 594 Score = 62.1 bits (148), Expect = 8e-10 Identities = 32/92 (34%), Positives = 51/92 (54%), Gaps = 2/92 (2%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ A Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDRKA 600 Query: 64 KADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 + + YE+ MK Y +GE+ K+ K K Sbjct: 601 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKK 632 >P26586 HIGH MOBILITY GROUP PROTEIN HOMOLOG TDP-1. Length = 271 Score = 68.7 bits (165), Expect = 8e-12 Identities = 47/145 (32%), Positives = 70/145 (47%), Gaps = 14/145 (9%) Query: 5 PKKP----RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 PKKP + +SSY FV REE K K+P + + + + W S K + Sbjct: 111 PKKPADYPKPAVSSYLLFVADQREELKAKNP--GMQNTAILQTLGKMWSDASDDVKEHYR 168 Query: 61 DMAKADKARYEREMKTYIPPKGETK----KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116 A+ DKAR+ RE+ Y G+ K KD NAPKR ++F F S++R K H Sbjct: 169 KKAEEDKARFRREVDEYKRQGGKEYGRGGKIKKDSNAPKRAMTSFMFFSSDFRSK----H 224 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQ 141 LSI +++K G W ++++ Sbjct: 225 SDLSIVEMSKAAGAAWKELGPEERK 249 Score = 51.5 bits (121), Expect = 1e-06 Identities = 27/73 (36%), Positives = 40/73 (53%), Gaps = 6/73 (8%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D P+ M+S+ FF + + KH D S+ E SK WK + +E+ +E+ Sbjct: 200 KKDSNAPKRAMTSFMFF----SSDFRSKHSDLSI--VEMSKAAGAAWKELGPEERKVYEE 253 Query: 62 MAKADKARYEREM 74 MA+ DK RY+REM Sbjct: 254 MAEKDKERYKREM 266 Score = 48.4 bits (113), Expect = 1e-05 Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 3/127 (2%) Query: 39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98 EF K+ K A + + +A A E KT K T+K K + PK Sbjct: 66 EFKKQLELALKEKDASKSSGGKGSKRARSAGAEAPSKT---KKEMTEKPKKPADYPKPAV 122 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDI 158 S++ LF ++ R ++K ++PG+ + + LG+MW++ + D K+ ++ Sbjct: 123 SSYLLFVADQREELKAKNPGMQNTAILQTLGKMWSDASDDVKEHYRKKAEEDKARFRREV 182 Query: 159 AAYRAKG 165 Y+ +G Sbjct: 183 DEYKRQG 189 >P11632 NONHISTONE CHROMOSOMAL PROTEIN 6A. Length = 93 Score = 68.3 bits (164), Expect = 1e-11 Identities = 32/69 (46%), Positives = 42/69 (60%) Query: 74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133 M T PK T +K KDPNAPKR SA+ F +E R ++ E+P ++ G V KKLGE W Sbjct: 1 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 60 Query: 134 NTAADDKQP 142 ++KQP Sbjct: 61 ALTPEEKQP 69 Score = 62.8 bits (150), Expect = 5e-10 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF R+ + ++PD + F + KK E+WK ++ +EK +E Sbjct: 15 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 72 Query: 62 MAKADKARYEREMKTY 77 A+ADK RYE E + Y Sbjct: 73 KAQADKKRYESEKELY 88 >Q04678 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) (RECOMBINATION SIGNAL Length = 669 Score = 67.1 bits (161), Expect = 2e-11 Identities = 29/56 (51%), Positives = 40/56 (70%) Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 KK KDPN PKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ Sbjct: 500 KKGKDPNVPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKE 555 Score = 59.3 bits (141), Expect = 5e-09 Identities = 38/116 (32%), Positives = 58/116 (49%), Gaps = 12/116 (10%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ A Sbjct: 504 DPNVPKRPMSAYMLWLNANREKIKSDHPGISI--TDLSKKAGELWKAMSKEKKEEWDRKA 561 Query: 64 KADKARYEREMKTY-IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG 118 + K YE+ MK Y + K E+ K + K+ E + K KGE G Sbjct: 562 EDAKRDYEKAMKEYSVGNKSESSKMERSKKKKKK---------QEKQMKGKGEKKG 608 >P27347 DNA-BINDING PROTEIN MNB1B (HMG1-LIKE PROTEIN). Length = 157 Score = 66.3 bits (159), Expect = 4e-11 Identities = 41/110 (37%), Positives = 51/110 (46%), Gaps = 5/110 (4%) Query: 53 AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKI 112 AK KG AKAD + P KG K KDPN PKR PSAFF+F E+R + Sbjct: 4 AKSKGA----AKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 59 Query: 113 KGEHP-GLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAY 161 K ++P S+ V K G+ W + + DK P IAAY Sbjct: 60 KEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAY 109 Score = 46.9 bits (109), Expect = 3e-05 Identities = 27/88 (30%), Positives = 47/88 (52%), Gaps = 3/88 (3%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R+E K+K+P + + + K +RWK++S +K + +A Sbjct: 37 DPNKPKRAPSAFFVFMEEFRKEFKEKNP-KNKSVAAVGKAAGDRWKSLSESDKAPY--VA 93 Query: 64 KADKARYEREMKTYIPPKGETKKKFKDP 91 KA+K + E KGE+ K P Sbjct: 94 KANKLKLEYNKAIAAYNKGESTAAKKAP 121 >P11633 NONHISTONE CHROMOSOMAL PROTEIN 6B. Length = 99 Score = 64.8 bits (155), Expect = 1e-10 Identities = 30/71 (42%), Positives = 43/71 (60%) Query: 72 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 +E K PK T ++ KDPNAPKR SA+ F +E R ++ E+P ++ G V + LGE Sbjct: 5 KEAKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGER 64 Query: 132 WNNTAADDKQP 142 W A++KQP Sbjct: 65 WKALTAEEKQP 75 Score = 62.5 bits (149), Expect = 6e-10 Identities = 30/76 (39%), Positives = 45/76 (58%), Gaps = 2/76 (2%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF R+ + ++PD V F + + ERWK ++A+EK +E Sbjct: 21 KKDPNAPKRGLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYES 78 Query: 62 MAKADKARYEREMKTY 77 A+ADK RYE E + Y Sbjct: 79 KAQADKKRYESEKELY 94 >P40620 HMG1/2-LIKE PROTEIN. Length = 149 Score = 64.0 bits (153), Expect = 2e-10 Identities = 36/93 (38%), Positives = 49/93 (51%), Gaps = 6/93 (6%) Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAA 137 P KG K+ KDPN PKRPPSAFF+F +++R + K +HP S+ V K GE W + + Sbjct: 33 PAKG---KEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSE 89 Query: 138 DDKQPXXXXXXXXXXXXXXDIAAYRAK--GKPD 168 ++K P + AY K GK D Sbjct: 90 EEKAPYVDRALKKKEEYEITLQAYNKKLEGKDD 122 Score = 56.2 bits (133), Expect = 4e-08 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F+ RE++KK HP+ + + + K C E WK++S +EK + D A Sbjct: 41 DPNKPKRPPSAFFVFMADFREQYKKDHPN-NKSVAAVGKACGEEWKSLSEEEKAPYVDRA 99 Query: 64 KADKARYEREMKTY 77 K YE ++ Y Sbjct: 100 LKKKEEYEITLQAY 113 >P40619 HMG1/2-LIKE PROTEIN. Length = 144 Score = 63.2 bits (151), Expect = 3e-10 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQ 141 +TKK KDPN PKRPPSAFF+F ++R K +HP S+ V K G+ W A +K Sbjct: 25 KTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKA 84 Query: 142 PXXXXXXXXXXXXXXDIAAYRAK 164 P ++ AY K Sbjct: 85 PFISKAEKRKQEYEKNLQAYNKK 107 Score = 50.8 bits (119), Expect = 2e-06 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R+ +K+KHP+ + + + K ++WK ++A EK F A Sbjct: 32 DPNKPKRPPSAFFVFMEDFRKTYKEKHPN-NKSVAVVGKAGGDKWKQLTAAEKAPFISKA 90 Query: 64 KADKARYEREMKTY 77 + K YE+ ++ Y Sbjct: 91 EKRKQEYEKNLQAY 104 >P40621 HMG1/2-LIKE PROTEIN. Length = 161 Score = 61.7 bits (147), Expect = 1e-09 Identities = 41/111 (36%), Positives = 52/111 (45%), Gaps = 6/111 (5%) Query: 53 AKEKGKFEDMAKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111 AK KG AKAD + P KG+ K KDPN PKR PSAFF+F E+R + Sbjct: 4 AKSKGA----AKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREE 59 Query: 112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAY 161 K ++P S+ V K GE W + + +K P IAAY Sbjct: 60 FKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAY 110 Score = 47.6 bits (111), Expect = 2e-05 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F+ REE K+K+P + + + K ERWK++S EK + A Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNP-KNKSVAAVGKAAGERWKSLSESEKAPYVAKA 96 Query: 64 KADKARYEREMKTYIPPKGET 84 K Y + + Y KGE+ Sbjct: 97 NKLKGEYNKAIAAY--NKGES 115 >P41848 PROBABLE STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 (SSRP1) Length = 697 Score = 59.3 bits (141), Expect = 5e-09 Identities = 35/108 (32%), Positives = 53/108 (48%), Gaps = 7/108 (6%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ S+Y + R E K+ + + +KK +WKTMS+ +K K+E+ A Sbjct: 552 DPNAPKRATSAYMQWFLASRNELKEDGDSVA----DVAKKGGAKWKTMSSDDKKKWEEKA 607 Query: 64 KADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEY 108 + DK+RYE+EMK Y PP +K + PS+ EY Sbjct: 608 EEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEY 655 Score = 56.2 bits (133), Expect = 4e-08 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 10/116 (8%) Query: 52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111 S + KG+ ++ + + R ++E G+ KK KDPNAPKR SA+ + R + Sbjct: 522 SKRRKGEPKEKREKKEKREKKE--------GKKGKKDKDPNAPKRATSAYMQWFLASRNE 573 Query: 112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXXXXDIAAYRAKGKP 167 +K + G S+ DVAKK G W ++DDK+ ++ YR G P Sbjct: 574 LKED--GDSVADVAKKGGAKWKTMSSDDKKKWEEKAEEDKSRYEKEMKEYRKNGPP 627 >Q02486 ARS-BINDING FACTOR 2 PRECURSOR. Length = 183 Score = 59.3 bits (141), Expect = 5e-09 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y ++Q R + K++P ++ +E SK E+W+ + A K K+ Sbjct: 40 KQGPKRPT---SAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYIS 94 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 K + Y++ KK+F + PK+P F + +E R ++ +HP S Sbjct: 95 ERKKLYSEYQK-----------AKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQ 143 Query: 122 GDVAKKLGEMWNN 134 D+ K +G+ W + Sbjct: 144 LDLMKIIGDKWQS 156 Score = 46.5 bits (108), Expect = 4e-05 Identities = 20/48 (41%), Positives = 30/48 (61%) Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 PKRP SA+FL+ ++R + E+P L +++K GE W N AD K+ Sbjct: 43 PKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKE 90 >Q05344 SINGLE-STRAND RECOGNITION PROTEIN (SSRP) (CHORION-FACTOR 5). Length = 723 Score = 58.9 bits (140), Expect = 7e-09 Identities = 35/101 (34%), Positives = 53/101 (51%), Gaps = 7/101 (6%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D KP+ +++ ++ RE +K+++P V +E +KK E WK + K+K K+ED Sbjct: 549 KKDSGKPKRATTAFMLWLNDTRESYKRENPGIKV--TEIAKKGGEMWKEL--KDKSKWED 604 Query: 62 MAKADKARYEREMKTYIPPKG---ETKKKFKDPNAPKRPPS 99 A DK RY EM+ Y P G + +K K K PS Sbjct: 605 AAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTEPS 645 Score = 55.8 bits (132), Expect = 6e-08 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 15/97 (15%) Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 K++ K E K +K E+E K +KKK KD PKR +AF L+ ++ R K Sbjct: 521 KKEKKSEKKEKKEKKHKEKERT-----KKPSKKK-KDSGKPKRATTAFMLWLNDTRESYK 574 Query: 114 GEHPGLSIGDVAKKLGEM---------WNNTAADDKQ 141 E+PG+ + ++AKK GEM W + AA DKQ Sbjct: 575 RENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQ 611 >P11873 NONHISTONE CHROMOSOMAL PROTEIN LG-1. Length = 100 Score = 58.6 bits (139), Expect = 9e-09 Identities = 28/85 (32%), Positives = 51/85 (59%), Gaps = 2/85 (2%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 P P+ +S++ F Q E+ KK++P+A + +E + +E+WK + KEK K+E + Sbjct: 9 PAPPKRPLSAFFLFKQHNYEQVKKENPNAKI--TELTSMIAEKWKAVGEKEKKKYETLQS 66 Query: 65 ADKARYEREMKTYIPPKGETKKKFK 89 KA+YE++M+ Y G+ +K+ K Sbjct: 67 EAKAKYEKDMQAYEKKYGKPEKQKK 91 Score = 46.9 bits (109), Expect = 3e-05 Identities = 25/79 (31%), Positives = 35/79 (43%), Gaps = 1/79 (1%) Query: 91 PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXX 150 P PKRP SAFFLF ++K E+P I ++ + E W +K+ Sbjct: 9 PAPPKRPLSAFFLFKQHNYEQVKKENPNAKITELTSMIAEKWKAVGEKEKKKYETLQSEA 68 Query: 151 XXXXXXDIAAYRAK-GKPD 168 D+ AY K GKP+ Sbjct: 69 KAKYEKDMQAYEKKYGKPE 87 >P33417 INTRASTRAND CROSSLINK RECOGNITION PROTEIN (STRUCTURE-SPECIFIC Length = 597 Score = 57.8 bits (137), Expect = 2e-08 Identities = 37/131 (28%), Positives = 59/131 (44%), Gaps = 16/131 (12%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y F + R E ++ P+A V E SK S RWK ++ +K F + Sbjct: 358 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 412 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + + +Y + ++ PKRP F F E RP + E+P + Sbjct: 413 EFRTNWEKYR-----------VVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGL 461 Query: 122 GDVAKKLGEMW 132 ++ K +GE W Sbjct: 462 IEITKIIGERW 472 Score = 39.5 bits (90), Expect = 0.005 Identities = 19/60 (31%), Positives = 30/60 (49%), Gaps = 1/60 (1%) Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E +K+ K PKRP SA+FLF R ++ + P + +++K W D K+P Sbjct: 351 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 409 Score = 29.7 bits (65), Expect = 4.2 Identities = 18/67 (26%), Positives = 31/67 (45%), Gaps = 5/67 (7%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PK+P G + F Q R K++PD + E +K ERW+ + +K ++ + K Sbjct: 434 PKRPSGP---FIQFTQEIRPTVVKENPDKGL--IEITKIIGERWRELDPAKKAEYTETYK 488 Query: 65 ADKARYE 71 +E Sbjct: 489 KRLKEWE 495 >P40625 HIGH-MOBILITY-GROUP PROTEIN (NONHISTONE CHROMOSOMAL PROTEIN). Length = 99 Score = 56.6 bits (134), Expect = 3e-08 Identities = 28/91 (30%), Positives = 54/91 (58%), Gaps = 2/91 (2%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 P P+ +S++ F Q ++ KK++P+A + +E + +E+WK ++ KEK K+E + + Sbjct: 8 PAPPKRPLSAFFLFKQHNYDQVKKENPNAKI--TELTSMIAEKWKHVTEKEKKKYEGLQQ 65 Query: 65 ADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 KA+YE++M+ Y G+ +K K + K Sbjct: 66 EAKAKYEKDMQAYEKKYGKPEKVKKIKKSKK 96 Score = 48.4 bits (113), Expect = 1e-05 Identities = 27/85 (31%), Positives = 38/85 (43%), Gaps = 1/85 (1%) Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXX 144 K K P PKRP SAFFLF ++K E+P I ++ + E W + +K+ Sbjct: 2 KVKDDKPAPPKRPLSAFFLFKQHNYDQVKKENPNAKITELTSMIAEKWKHVTEKEKKKYE 61 Query: 145 XXXXXXXXXXXXDIAAYRAK-GKPD 168 D+ AY K GKP+ Sbjct: 62 GLQQEAKAKYEKDMQAYEKKYGKPE 86 >Q05153 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 HOMOLOG (HMG PROTEIN). Length = 644 Score = 56.2 bits (133), Expect = 4e-08 Identities = 36/92 (39%), Positives = 46/92 (49%), Gaps = 14/92 (15%) Query: 53 AKEKGKFEDMAKADKARYEREMKTY--IPPKGET------------KKKFKDPNAPKRPP 98 A E G E K+ K ++E + +PPK +T KK KDPNAPKR Sbjct: 507 ASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRKTVAADEGSSKRKKPKKKKDPNAPKRAM 566 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGE 130 S F F R IK EHPG++ G+V K LG+ Sbjct: 567 SGFMFFSQMERDNIKKEHPGIAFGEVGKVLGD 598 Score = 44.1 bits (102), Expect = 2e-04 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ MS + FF Q R+ KK+HP + F E K ++ K + Sbjct: 556 KKDPNAPKRAMSGFMFFSQMERDNIKKEHP--GIAFGEVGKVLGDKCVKCLLMIKSHMKP 613 Query: 62 MAKADKARYEREMKTYIPPK 81 + DK RY+ E+ Y P+ Sbjct: 614 RLQVDKQRYKDEISDYKNPQ 633 >P26585 HMG1/2-LIKE PROTEIN (SB11 PROTEIN). Length = 152 Score = 56.2 bits (133), Expect = 4e-08 Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPXX 144 K KDPN PKRPPSAFF+F E+R EHP ++ V K G W + +K P Sbjct: 36 KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYV 95 Query: 145 XXXXXXXXXXXXDIAAYRAK 164 ++ AY K Sbjct: 96 AKSEKRKVEYEKNMRAYNKK 115 Score = 51.2 bits (120), Expect = 1e-06 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 1 GKG----DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 56 GKG DP KP+ S++ F++ R+ K+HP+ S K +WKTMS EK Sbjct: 33 GKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKA-VSAVGKAAGAKWKTMSDAEK 91 Query: 57 GKFEDMAKADKARYEREMKTYIPPKGE 83 + ++ K YE+ M+ Y + E Sbjct: 92 APYVAKSEKRKVEYEKNMRAYNKKQAE 118 >P40627 HIGH-MOBILITY-GROUP PROTEIN C (FRAGMENT). Length = 92 Score = 56.2 bits (133), Expect = 4e-08 Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 2/85 (2%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 P P+ +S++ F Q E+ KK++P+A + +E + +E+WK + KEK K+E + Sbjct: 1 PAPPKRPLSAFFLFKQHNYEQVKKENPNAKI--TELTSMIAEKWKAVGEKEKKKYETLQS 58 Query: 65 ADKARYEREMKTYIPPKGETKKKFK 89 KA+YE+ ++ Y G+ +K+ K Sbjct: 59 EAKAKYEKALQAYEKKYGKPEKQKK 83 Score = 44.1 bits (102), Expect = 2e-04 Identities = 24/79 (30%), Positives = 34/79 (42%), Gaps = 1/79 (1%) Query: 91 PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXX 150 P PKRP SAFFLF ++K E+P I ++ + E W +K+ Sbjct: 1 PAPPKRPLSAFFLFKQHNYEQVKKENPNAKITELTSMIAEKWKAVGEKEKKKYETLQSEA 60 Query: 151 XXXXXXDIAAYRAK-GKPD 168 + AY K GKP+ Sbjct: 61 KAKYEKALQAYEKKYGKPE 79 >P40628 HIGH MOBILITY GROUP PROTEIN HOMOLOG. Length = 221 Score = 55.4 bits (131), Expect = 8e-08 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 15/134 (11%) Query: 8 PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADK 67 P+ SSY FF Q R + PD N + ++W + +++ K++ MA D+ Sbjct: 54 PKRNKSSYLFFCQEIRPSIVAEMPDIKPN--QVMVHLGKKWSELPLEDRKKYDVMAVEDR 111 Query: 68 ARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK 127 RY E KK P S + FC++ R KIK + P L+ D+ K Sbjct: 112 KRYLASK--------EANKKLNKPVKI----SGYLQFCADER-KIKLKFPDLTTKDITAK 158 Query: 128 LGEMWNNTAADDKQ 141 LG MWN+ ++ Q Sbjct: 159 LGGMWNDYKKNNPQ 172 Score = 43.0 bits (99), Expect = 4e-04 Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 92 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 N PKR S++ FC E RP I E P + V LG+ W+ +D++ Sbjct: 52 NVPKRNKSSYLFFCQEIRPSIVAEMPDIKPNQVMVHLGKKWSELPLEDRK 101 >P40632 HIGH MOBILITY GROUP PROTEIN HOMOLOG NHP1. Length = 97 Score = 55.0 bits (130), Expect = 1e-07 Identities = 27/80 (33%), Positives = 41/80 (50%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +SSY FF + R E ++P+ + + + K W +S +EK +E Sbjct: 17 KKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKPYER 76 Query: 62 MAKADKARYEREMKTYIPPK 81 M+ D+ RYERE Y K Sbjct: 77 MSDEDRVRYEREKAEYAQRK 96 Score = 47.6 bits (111), Expect = 2e-05 Identities = 22/60 (36%), Positives = 36/60 (59%), Gaps = 2/60 (3%) Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS--IGDVAKKLGEMWNNTAADDKQP 142 +K KDPNAPKR S++ F E R +I E+P ++ + + K +G WN + ++K+P Sbjct: 14 RKAKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKP 73 >P25977;P25978 NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING FACTOR 1) (UBF-1). Length = 764 Score = 53.9 bits (127), Expect = 2e-07 Identities = 35/126 (27%), Positives = 53/126 (41%), Gaps = 29/126 (23%) Query: 44 CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE---------------TKKKF 88 CS++WK +S KEK + K YE E+ ++ E KK+ Sbjct: 328 CSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQT 387 Query: 89 KDPNA--------------PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134 P + PKRP SA F+F E R +++ E P LS ++ + L MWN+ Sbjct: 388 TSPASKKPSQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWND 447 Query: 135 TAADDK 140 + K Sbjct: 448 LSEKKK 453 Score = 52.3 bits (123), Expect = 7e-07 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 18/143 (12%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 400 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 457 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 A KA+ ER+ P GE + + K P +PKR ++ + G++ Sbjct: 458 AREAALKAQSERK------PGGEREDRGKLPESPKRAEEI-------WQQSVIGDYLARF 504 Query: 121 IGDVAKKLGEM---WNNTAADDK 140 D K L M WNN +K Sbjct: 505 KNDRVKALKAMEMTWNNMEKKEK 527 Score = 44.5 bits (103), Expect = 1e-04 Identities = 32/135 (23%), Positives = 61/135 (44%), Gaps = 8/135 (5%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P P+ ++ Y F R ++ K HP+ S + +K S+++K + K+K K+ Sbjct: 106 KKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSN--LDLTKILSKKYKELPEKKKMKYIQ 163 Query: 62 MAKADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG 118 + +K +ER + + P + KK P PK P ++ + K++ P Sbjct: 164 DFQREKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PD 220 Query: 119 LSIGDVAKKLGEMWN 133 + +V LG+ W+ Sbjct: 221 ATTKEVKDSLGKQWS 235 Score = 41.4 bits (95), Expect = 0.001 Identities = 29/97 (29%), Positives = 41/97 (41%), Gaps = 5/97 (5%) Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGET--KKKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 519 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 578 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 E GE L + + ++G W + K+ Sbjct: 579 SQELLS--NGELNHLPLKERMVEIGSRWQRISQSQKE 613 Score = 37.9 bits (86), Expect = 0.014 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 7/99 (7%) Query: 35 VNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNA 93 V F +FS C +W +S E KF + + E Y KG KK K P+ Sbjct: 58 VAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--KKLKKHPDF 111 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 PK+P + +F F E R K HP +S D+ K L + + Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKY 150 Score = 35.6 bits (80), Expect = 0.073 Identities = 27/109 (24%), Positives = 46/109 (41%), Gaps = 20/109 (18%) Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP--- 79 ++ + K PDA+ E ++W +S K++ K+ A + YE M+ YI Sbjct: 211 KKVYLKVRPDATTK--EVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHP 268 Query: 80 --------------PKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIK 113 K E + K K D K PP+++ L+C+E +K Sbjct: 269 ELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMK 317 >P17480 NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING FACTOR 1) (UBF-1) Length = 764 Score = 53.9 bits (127), Expect = 2e-07 Identities = 35/126 (27%), Positives = 53/126 (41%), Gaps = 29/126 (23%) Query: 44 CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE---------------TKKKF 88 CS++WK +S KEK + K YE E+ ++ E KK+ Sbjct: 328 CSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQA 387 Query: 89 KDPNA--------------PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134 P + PKRP SA F+F E R +++ E P LS ++ + L MWN+ Sbjct: 388 TSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWND 447 Query: 135 TAADDK 140 + K Sbjct: 448 LSEKKK 453 Score = 53.1 bits (125), Expect = 4e-07 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 18/143 (12%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 400 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 457 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 A KA+ ER+ P GE +++ K P +PKR ++ + G++ Sbjct: 458 AREAALKAQSERK------PGGEREERGKLPESPKRAEEI-------WQQSVIGDYLARF 504 Query: 121 IGDVAKKLGEM---WNNTAADDK 140 D K L M WNN +K Sbjct: 505 KNDRVKALKAMEMTWNNMEKKEK 527 Score = 44.5 bits (103), Expect = 1e-04 Identities = 32/135 (23%), Positives = 61/135 (44%), Gaps = 8/135 (5%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P P+ ++ Y F R ++ K HP+ S + +K S+++K + K+K K+ Sbjct: 106 KKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSN--LDLTKILSKKYKELPEKKKMKYIQ 163 Query: 62 MAKADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG 118 + +K +ER + + P + KK P PK P ++ + K++ P Sbjct: 164 DFQREKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PD 220 Query: 119 LSIGDVAKKLGEMWN 133 + +V LG+ W+ Sbjct: 221 ATTKEVKDSLGKQWS 235 Score = 41.4 bits (95), Expect = 0.001 Identities = 29/97 (29%), Positives = 41/97 (41%), Gaps = 5/97 (5%) Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGET--KKKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 519 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 578 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 E GE L + + ++G W + K+ Sbjct: 579 SQELLS--NGELNHLPLKERMVEIGSRWQRISQSQKE 613 Score = 37.9 bits (86), Expect = 0.014 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 7/99 (7%) Query: 35 VNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNA 93 V F +FS C +W +S E KF + + E Y KG KK K P+ Sbjct: 58 VAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--KKLKKHPDF 111 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 PK+P + +F F E R K HP +S D+ K L + + Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKY 150 Score = 35.6 bits (80), Expect = 0.073 Identities = 27/109 (24%), Positives = 46/109 (41%), Gaps = 20/109 (18%) Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP--- 79 ++ + K PDA+ E ++W +S K++ K+ A + YE M+ YI Sbjct: 211 KKVYLKVRPDATTK--EVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHP 268 Query: 80 --------------PKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIK 113 K E + K K D K PP+++ L+C+E +K Sbjct: 269 ELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMK 317 >P25976 NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING FACTOR 1) (UBF-1). Length = 765 Score = 53.5 bits (126), Expect = 3e-07 Identities = 35/126 (27%), Positives = 52/126 (40%), Gaps = 29/126 (23%) Query: 44 CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE---------------TKKKF 88 CS++WK +S KEK + K YE E+ ++ E KK+ Sbjct: 328 CSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQT 387 Query: 89 KDPNA--------------PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134 P + PKRP SA F+F E R +++ E P LS ++ + L MWN+ Sbjct: 388 TSPASKKPSQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWND 447 Query: 135 TAADDK 140 K Sbjct: 448 LTEKKK 453 Score = 51.2 bits (120), Expect = 1e-06 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 18/143 (12%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W ++ K+K K++ Sbjct: 400 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLTEKKKAKYK 457 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 A KA+ ER+ P GE + + K P +PKR ++ + G++ Sbjct: 458 AREAALKAQSERK------PGGEREDRGKLPESPKRAEEI-------WQQSVIGDYLARF 504 Query: 121 IGDVAKKLGEM---WNNTAADDK 140 D K L M WNN +K Sbjct: 505 KNDRVKALKAMEMTWNNMEKKEK 527 Score = 44.5 bits (103), Expect = 1e-04 Identities = 32/135 (23%), Positives = 61/135 (44%), Gaps = 8/135 (5%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P P+ ++ Y F R ++ K HP+ S + +K S+++K + K+K K+ Sbjct: 106 KKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSN--LDLTKILSKKYKELPEKKKMKYIQ 163 Query: 62 MAKADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG 118 + +K +ER + + P + KK P PK P ++ + K++ P Sbjct: 164 DFQREKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PD 220 Query: 119 LSIGDVAKKLGEMWN 133 + +V LG+ W+ Sbjct: 221 ATTKEVKDSLGKQWS 235 Score = 41.4 bits (95), Expect = 0.001 Identities = 29/97 (29%), Positives = 41/97 (41%), Gaps = 5/97 (5%) Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGET--KKKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 519 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 578 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 E GE L + + ++G W + K+ Sbjct: 579 SQELLS--NGELNHLPLKERMVEIGSRWQRISQSQKE 613 Score = 37.9 bits (86), Expect = 0.014 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 7/99 (7%) Query: 35 VNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNA 93 V F +FS C +W +S E KF + + E Y KG KK K P+ Sbjct: 58 VAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--KKLKKHPDF 111 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 PK+P + +F F E R K HP +S D+ K L + + Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKY 150 Score = 34.4 bits (77), Expect = 0.16 Identities = 27/109 (24%), Positives = 45/109 (40%), Gaps = 20/109 (18%) Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP--- 79 ++ + K PDA+ E ++W +S K+ K+ A + YE M+ YI Sbjct: 211 KKVYLKVRPDATTK--EVKDSLGKQWSQLSDKKTLKWIHKALEQRKEYEEIMRDYIQKHP 268 Query: 80 --------------PKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIK 113 K E + K K D K PP+++ L+C+E +K Sbjct: 269 ELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMK 317 >P54277 PMS1 PROTEIN HOMOLOG 1 (DNA MISMATCH REPAIR PROTEIN PMS1). Length = 932 Score = 50.4 bits (118), Expect = 3e-06 Identities = 35/98 (35%), Positives = 53/98 (53%), Gaps = 7/98 (7%) Query: 6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 65 KKP MS+ A FVQ R + ++P S+ + + + E WKT+S +EK K+E+ A Sbjct: 572 KKP---MSASALFVQDHRPQFLIENPKTSLE--DATLQIEELWKTLSEEEKLKYEEKATK 626 Query: 66 DKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 103 D RY +MK I + E++ KD +P SA+ L Sbjct: 627 DLERYNSQMKRAI--EQESQMSLKDGRKKIKPTSAWNL 662 Score = 36.0 bits (81), Expect = 0.056 Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 K+P SA LF ++RP+ E+P S+ D ++ E+W + ++K Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEK 617 >P40630 TESTIS-SPECIFIC HIGH MOBILITY GROUP PROTEIN (TS-HMG). Length = 199 Score = 50.4 bits (118), Expect = 3e-06 Identities = 45/158 (28%), Positives = 68/158 (42%), Gaps = 30/158 (18%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP MSSY F + K KHPDA + SE +K + W+ + EK +E K Sbjct: 5 PKKP---MSSYLRFSTEQLPKFKAKHPDAKL--SELVRKIAALWRELPEAEKKVYEADFK 59 Query: 65 ADKARYEREMKTY---IPP-------KGETKKKFKDP-----------NAPKRPPSAFFL 103 A+ Y+ + Y + P K +++ K PKRP SA+ + Sbjct: 60 AEWKAYKEAVSKYKEQLTPSQLMGMEKEARQRRLKKKALVKRRELILLGKPKRPRSAYNI 119 Query: 104 FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 + SE + K + S K + E W N + ++KQ Sbjct: 120 YVSESFQEAKDD----SAQGKLKLVNEAWKNLSPEEKQ 153 Score = 44.5 bits (103), Expect = 1e-04 Identities = 25/75 (33%), Positives = 39/75 (51%), Gaps = 9/75 (12%) Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G PK+PR S+Y +V +E K + K +E WK +S +EK + + Sbjct: 108 GKPKRPR---SAYNIYVSESFQEAKDDSAQGKL------KLVNEAWKNLSPEEKQAYIQL 158 Query: 63 AKADKARYEREMKTY 77 AK D+ RY+ EMK++ Sbjct: 159 AKDDRIRYDNEMKSW 173 >P40622 MOBILITY GROUP PROTEIN 1A. Length = 114 Score = 49.6 bits (116), Expect = 4e-06 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 12/100 (12%) Query: 6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 65 +KP+ +S+Y ++ + RE KK++PD V +E +KK E W+ M K+K ++E A Sbjct: 3 EKPKRPLSAYMLWLNSARESIKKENPDFKV--TEIAKKGGELWRGM--KDKSEWEAKAAK 58 Query: 66 DKARYEREMKTYIPPKGE------TKKKFKDPNAPKRPPS 99 K YE+ MK + G+ TKK+ K A K+ P+ Sbjct: 59 MKEEYEKAMKEFERNGGDKSSGASTKKRGK--AAEKKKPA 96 Score = 42.6 bits (98), Expect = 6e-04 Identities = 18/39 (46%), Positives = 26/39 (66%) Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 PKRP SA+ L+ + R IK E+P + ++AKK GE+W Sbjct: 5 PKRPLSAYMLWLNSARESIKKENPDFKVTEIAKKGGELW 43 >Q00059 MITOCHONDRIAL TRANSCRIPTION FACTOR 1 PRECURSOR (MTTF1). Length = 246 Score = 48.8 bits (114), Expect = 8e-06 Identities = 41/158 (25%), Positives = 71/158 (43%), Gaps = 30/158 (18%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP +SSY F + K ++PDA +E ++ ++RW+ + +K ++D + Sbjct: 50 PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYR 104 Query: 65 ADKARYERE--------------------MKTYIPPKGETKKK-FKDPNAPKRPPSAFFL 103 A+ Y+ E M ++ K TKKK PKRP SA+ + Sbjct: 105 AEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKKELTLLGKPKRPRSAYNV 164 Query: 104 FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 + +E + KG+ P + K + E W N + +K+ Sbjct: 165 YVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKE 198 Score = 42.6 bits (98), Expect = 6e-04 Identities = 26/75 (34%), Positives = 36/75 (47%), Gaps = 9/75 (12%) Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G PK+PR S+Y +V +E K P + K E WK +S EK + Sbjct: 153 GKPKRPR---SAYNVYVAERFQEAKGDSPQEKL------KTVKENWKNLSDSEKELYIQH 203 Query: 63 AKADKARYEREMKTY 77 AK D+ RY EMK++ Sbjct: 204 AKEDETRYHNEMKSW 218 Score = 30.9 bits (68), Expect = 1.9 Identities = 11/50 (22%), Positives = 24/50 (48%) Query: 92 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 + PK+P S++ F E P K ++P ++ +++ + W K+ Sbjct: 48 SCPKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKK 97 >P25980 NUCLEOLAR TRANSCRIPTION FACTOR 2 (UPSTREAM BINDING FACTOR-2) (UBF-2). Length = 701 Score = 47.6 bits (111), Expect = 2e-05 Identities = 31/132 (23%), Positives = 61/132 (45%), Gaps = 2/132 (1%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P+ P+ ++ Y F R ++ K HP+ S + +K S+++K + K+K K+ Sbjct: 106 KKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMSN--LDLTKILSKKYKELPEKKKMKYIQ 163 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + +K +ER M + + + K + P++P + L+ + R H S Sbjct: 164 DFQREKQDFERNMAKFREEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADAST 223 Query: 122 GDVAKKLGEMWN 133 D+ LG+ W+ Sbjct: 224 KDIKDALGKQWS 235 Score = 36.4 bits (82), Expect = 0.042 Identities = 29/91 (31%), Positives = 42/91 (45%), Gaps = 10/91 (10%) Query: 44 CSERWKTMSAKEKGKFEDMAKA--DKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAF 101 C ++W +S E KF + + D + R P KG KK K P PK+P + + Sbjct: 68 CRQKWMEIS-NEVRKFRTLTELILDADEHVRH-----PYKG--KKLKKHPEFPKKPLTPY 119 Query: 102 FLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 F F E R K HP +S D+ K L + + Sbjct: 120 FRFFMEKRAKYAKLHPEMSNLDLTKILSKKY 150 Score = 32.8 bits (73), Expect = 0.48 Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 44 CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYI 78 CS+RWK +S KEK + + K YE E+ ++ Sbjct: 328 CSQRWKLLSQKEKDAYHKKCEQRKKDYEVELMRFL 362 Score = 32.8 bits (73), Expect = 0.48 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 5/96 (5%) Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTY--IPPKGETKKKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P KK K PK+ P + + F Sbjct: 459 WLNMEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKKAPMNGYQKF 518 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 E GE L + + ++G W+ + K Sbjct: 519 SQELLS--NGELNHLPLKERMVEIGSRWHRISPTQK 552 Score = 32.8 bits (73), Expect = 0.48 Identities = 25/109 (22%), Positives = 46/109 (41%), Gaps = 20/109 (18%) Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP-- 80 R+ + K H DAS + ++W + K++ K+ A + +YE M+ Y+ Sbjct: 211 RKVYLKLHADASTK--DIKDALGKQWSQLPDKKRLKWIHKALEQRKQYEGVMREYMQKHP 268 Query: 81 ---------------KGETKKKFKDPNAP-KRPPSAFFLFCSEYRPKIK 113 K E + K K P K PP+++ ++C+E +K Sbjct: 269 ELNITEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSMYCAELMANMK 317 >P25979 NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING FACTOR-1) (UBF-1). Length = 677 Score = 47.6 bits (111), Expect = 2e-05 Identities = 31/132 (23%), Positives = 61/132 (45%), Gaps = 2/132 (1%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P+ P+ ++ Y F R ++ K HP+ S + +K S+++K + K+K K+ Sbjct: 106 KKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMSN--LDLTKILSKKYKELPEKKKMKYIQ 163 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + +K +ER + + + + K + P++P + L+ + R H S Sbjct: 164 DFQREKLEFERNLARFREEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADAST 223 Query: 122 GDVAKKLGEMWN 133 DV LG+ W+ Sbjct: 224 KDVKDALGKQWS 235 Score = 37.9 bits (86), Expect = 0.014 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 E H + A N+S C ++W +S E KF +++ + E P KG Sbjct: 50 ESHLDWNKLAFKNYS--GSMCRQKWMEIS-NEVRKFRTLSELI---LDAEEHVRHPYKG- 102 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 KK K P PK+P + +F F E R K HP +S D+ K L + + Sbjct: 103 -KKLKKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKY 150 Score = 33.6 bits (75), Expect = 0.28 Identities = 28/102 (27%), Positives = 40/102 (38%), Gaps = 5/102 (4%) Query: 42 KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY--IPPKGETKKKFKDPNAPKRPP- 98 K W M KEK + A D+ RYERE+ P KK K PK+ P Sbjct: 431 KSMEGTWLNMEKKEKIMWIKKAAEDQKRYERELSDMRATPTPTTAGKKVKFLGEPKKAPM 490 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 + + F E GE L + + ++G W+ + K Sbjct: 491 NGYQKFSQELLS--NGELNHLPLKERMVEIGSRWHRISPSQK 530 Score = 33.2 bits (74), Expect = 0.37 Identities = 14/44 (31%), Positives = 24/44 (53%) Query: 44 CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 CS+RWK +S KEK + + K YE E+ ++ E +++ Sbjct: 328 CSQRWKLLSQKEKDAYNKKCEQRKKDYEVELMRFLESLPEEEQQ 371 Score = 32.8 bits (73), Expect = 0.48 Identities = 25/109 (22%), Positives = 47/109 (42%), Gaps = 20/109 (18%) Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP-- 80 R+ + K H DAS + ++W ++ K++ K+ A + +YE M+ Y+ Sbjct: 211 RKVYLKLHADASTK--DVKDALGKQWSQLTDKKRLKWIHKALEQRKQYEGIMREYMQKHP 268 Query: 81 ---------------KGETKKKFKDPNAP-KRPPSAFFLFCSEYRPKIK 113 K E + K K P K PP+++ ++C+E +K Sbjct: 269 ELNIAEEGITRSTLTKAERQLKDKFDGRPTKPPPNSYSMYCAELMANMK 317 >Q03435 NHP10 PROTEIN. Length = 203 Score = 47.3 bits (110), Expect = 2e-05 Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 7/78 (8%) Query: 68 ARYEREMKTYIPPKGETKK---KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDV 124 A +++E+ T K +TK+ K +DPN PKRP +A+ L+C + +I+ ++ L DV Sbjct: 65 ASFKQELLTKPFRKSKTKRHKVKERDPNMPKRPTNAYLLYCEMNKERIR-QNGSL---DV 120 Query: 125 AKKLGEMWNNTAADDKQP 142 + L E W N D++P Sbjct: 121 TRDLAEGWKNLNEQDRKP 138 Score = 32.8 bits (73), Expect = 0.48 Identities = 14/74 (18%), Positives = 36/74 (47%), Gaps = 6/74 (8%) Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ ++Y + + +E ++ + ++ +E WK ++ +++ + + Sbjct: 90 DPNMPKRPTNAYLLYCEMNKERIRQN------GSLDVTRDLAEGWKNLNEQDRKPYYKLY 143 Query: 64 KADKARYEREMKTY 77 D+ RY+ EM+ Y Sbjct: 144 SEDRERYQMEMEIY 157 >P40631 MICRONUCLEAR LINKER HISTONE POLYPROTEIN (CONTAINS: LINKER HISTONE Length = 633 Score = 47.3 bits (110), Expect = 2e-05 Identities = 39/135 (28%), Positives = 61/135 (44%), Gaps = 16/135 (11%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++Y FV +K NF +KK + +S EK + + + Sbjct: 13 PKKPFS--NTYQAFVL-------EKKNALGKNFD--NKKVQADYNKLSNNEKERLQKLVD 61 Query: 65 ADKARYEREMKTY---IPPKGETK--KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 + +Y+ E+ Y I KG+ K + K P PK+P +FF F E R K +H L Sbjct: 62 NAEEKYKEELFHYNNHIQGKGKQKYVPQVKVPEKPKKPIGSFFRFLEENRQKYAAKHKDL 121 Query: 120 SIGDVAKKLGEMWNN 134 + + K + E +NN Sbjct: 122 TNAKILKIMSEDFNN 136 Score = 37.9 bits (86), Expect = 0.014 Identities = 25/94 (26%), Positives = 48/94 (50%), Gaps = 4/94 (4%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 P+KP+ + S+ F++ R+++ KH D + ++ K SE + + KE +ED + Sbjct: 93 PEKPKKPIGSFFRFLEENRQKYAAKHKD--LTNAKILKIMSEDFNNLPQKEVKVYEDAYQ 150 Query: 65 ADKARYEREMKTYIPPKGET--KKKFKDPNAPKR 96 + A+Y E K + G+ KK+ K N+ + Sbjct: 151 KEYAQYLVEFKKWNEKYGQAAQKKQTKRKNSTSK 184 >Q06943 HIGH MOBILITY GROUP PROTEIN Z (HMG-Z). Length = 111 Score = 46.1 bits (107), Expect = 5e-05 Identities = 19/39 (48%), Positives = 29/39 (73%) Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 PKRP SA+ L+ +E R +IK ++PG + D+AK+ GE+W Sbjct: 6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELW 44 Score = 39.5 bits (90), Expect = 0.005 Identities = 26/94 (27%), Positives = 47/94 (49%), Gaps = 10/94 (10%) Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66 +P+ +S+Y ++ RE+ KK +P + V ++ +K+ E W+ + K+K ++E A Sbjct: 5 RPKRPLSAYMLWLNETREQIKKDNPGSKV--TDIAKRGGELWRGL--KDKTEWEQKAIKM 60 Query: 67 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSA 100 K Y + +K Y G D APK+ A Sbjct: 61 KEEYNKAVKEYEANGG------TDSGAPKKRKKA 88 >Q39601 STRUCTURE-SPECIFIC RECOGNITION PROTEIN 1 HOMOLOG (HMG PROTEIN). Length = 639 Score = 45.7 bits (106), Expect = 7e-05 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133 K + +KK KDPNAPK SAF F R +K ++PG++ DV K LG+ N Sbjct: 543 KKKKQKKKKDPNAPKSI-SAFMFFSQTERENVKKDNPGIAFTDVGKVLGDRCN 594 Score = 43.4 bits (100), Expect = 3e-04 Identities = 26/80 (32%), Positives = 40/80 (49%), Gaps = 3/80 (3%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S++ FF QT RE KK +P + F++ K +R ++K + Sbjct: 550 KKDPNAPKS-ISAFMFFSQTERENVKKDNP--GIAFTDVGKVLGDRCNKCQLRKKHLLKQ 606 Query: 62 MAKADKARYEREMKTYIPPK 81 ADK RY E+ Y P+ Sbjct: 607 RLVADKKRYTDEISNYKNPQ 626 >Q05783 HIGH MOBILITY GROUP PROTEIN D (HMG-D). Length = 112 Score = 45.3 bits (105), Expect = 9e-05 Identities = 19/39 (48%), Positives = 28/39 (71%) Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 PKRP SA+ L+ + R IK E+PG+ + +VAK+ GE+W Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELW 43 Score = 41.4 bits (95), Expect = 0.001 Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66 KP+ +S+Y ++ + RE K+++P + +E +K+ E W+ M K+K ++E A Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENP--GIKVTEVAKRGGELWRAM--KDKSEWEAKAAKA 59 Query: 67 KARYEREMKTY 77 K Y+R +K + Sbjct: 60 KDDYDRAVKEF 70 >P40623 MOBILITY GROUP PROTEIN 1B. Length = 110 Score = 44.9 bits (104), Expect = 1e-04 Identities = 29/92 (31%), Positives = 50/92 (53%), Gaps = 6/92 (6%) Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66 KP+ +S+Y ++ + RE K+++PD V +E +KK E W+ + K+K ++E A Sbjct: 4 KPKRPLSAYMLWLNSARESIKRENPDFKV--TEVAKKGGELWRGL--KDKSEWEAKAATA 59 Query: 67 KARYEREMKTY--IPPKGETKKKFKDPNAPKR 96 K Y R ++ Y G+ K K + APK+ Sbjct: 60 KQNYIRALQEYERNGGGGDDKGKKRKGAAPKK 91 Score = 43.0 bits (99), Expect = 4e-04 Identities = 19/39 (48%), Positives = 26/39 (65%) Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 PKRP SA+ L+ + R IK E+P + +VAKK GE+W Sbjct: 5 PKRPLSAYMLWLNSARESIKRENPDFKVTEVAKKGGELW 43 >Q10241 HYPOTHETICAL 26.3 KD PROTEIN C4G9.11C IN CHROMOSOME I. Length = 223 Score = 43.8 bits (101), Expect = 3e-04 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 31/125 (24%) Query: 46 ERWKTMSAKE----KGKFEDMAKADKARYEREMKTYIPPK--GETKKKFKD--------- 90 +++K ++A E K K ++ A+K R+ ++++ P + E +++ K+ Sbjct: 80 QKYKALTADEIQKYKNKLQEQFDAEKKRFMETLRSFTPTEIDSENRRRSKEAHSTGSRYY 139 Query: 91 ----PNAPKRPPSAFFLFCSEYR--PKIKGEHPGLSIGDVAKKLGE-------MWNNTAA 137 P+ PK+P SAF LF E R PK++ E L I + L E W A Sbjct: 140 RLRHPDVPKKPSSAFILFYKELRNNPKLRQE---LGIPEAISTLVEETQNASKAWKELAE 196 Query: 138 DDKQP 142 D K+P Sbjct: 197 DKKKP 201 Score = 37.1 bits (84), Expect = 0.025 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKH----PDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 PKKP S++ F + R K + P+A E ++ S+ WK ++ +K F Sbjct: 147 PKKPS---SAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFI 203 Query: 61 DMAKADKARYEREMK 75 D +KA K +Y++ MK Sbjct: 204 DKSKALKEQYDKFMK 218 >P40626 HIGH-MOBILITY-GROUP PROTEIN B. Length = 143 Score = 43.8 bits (101), Expect = 3e-04 Identities = 24/86 (27%), Positives = 41/86 (46%), Gaps = 2/86 (2%) Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 P KP K FF+ K++ ++ E K SE +K + KEK K+E+ + Sbjct: 15 PSKP--KRPQTGFFIYKSEVFAKRRTECPTLKVPEIVSKISEEYKALPEKEKQKYEEAYR 72 Query: 65 ADKARYEREMKTYIPPKGETKKKFKD 90 +KA Y+++ + G+ +K KD Sbjct: 73 KEKATYDKQNDQWKEKYGDIEKSLKD 98 Score = 37.9 bits (86), Expect = 0.014 Identities = 17/51 (33%), Positives = 28/51 (54%) Query: 91 PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 P+ PKRP + FF++ SE K + E P L + ++ K+ E + +KQ Sbjct: 15 PSKPKRPQTGFFIYKSEVFAKRRTECPTLKVPEIVSKISEEYKALPEKEKQ 65 >O00570 SOX-1 PROTEIN. Length = 387 Score = 40.6 bits (93), Expect = 0.002 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 1/90 (1%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 G + R K AF V + + K + ++ SE SK+ WK MS EK F Sbjct: 42 GGAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFI 101 Query: 61 DMAKADKARYEREMKTY-IPPKGETKKKFK 89 D AK +A + +E Y P+ +TK K Sbjct: 102 DEAKRLRALHMKEHPDYKYRPRRKTKTLLK 131 Score = 34.8 bits (78), Expect = 0.12 Identities = 15/48 (31%), Positives = 28/48 (58%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R K+ E+P + +++K+LG W + +K+P Sbjct: 52 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRP 99 >P53783 SOX-1 PROTEIN. Length = 391 Score = 39.9 bits (91), Expect = 0.004 Identities = 27/82 (32%), Positives = 38/82 (45%), Gaps = 1/82 (1%) Query: 9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKA 68 R K AF V + + K + ++ SE SK+ WK MS EK F D AK +A Sbjct: 50 RVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRA 109 Query: 69 RYEREMKTY-IPPKGETKKKFK 89 + +E Y P+ +TK K Sbjct: 110 LHMKEHPDYKYRPRRKTKTLLK 131 Score = 34.8 bits (78), Expect = 0.12 Identities = 15/48 (31%), Positives = 28/48 (58%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R K+ E+P + +++K+LG W + +K+P Sbjct: 52 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRP 99 >P55863 TRANSCRIPTION FACTOR SOX-3. Length = 309 Score = 39.5 bits (90), Expect = 0.005 Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 139 P G+ D + KRP +AF ++ R K+ E+P + +++K+LG W + D Sbjct: 26 PGGKGNASTLDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSD 85 Query: 140 KQP 142 K+P Sbjct: 86 KRP 88 Score = 36.4 bits (82), Expect = 0.042 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%) Query: 1 GKGDPK---KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKG 57 GKG+ + R K AF V + + K + ++ SE SK+ WK +S +K Sbjct: 28 GKGNASTLDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSDKR 87 Query: 58 KFEDMAKADKARYEREMKTY-IPPKGETKKKFK 89 F D AK +A + ++ Y P+ +TK K Sbjct: 88 PFIDEAKRLRAVHMKDYPDYKYRPRRKTKTLLK 120 >Q03257 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 240 Score = 39.1 bits (89), Expect = 0.006 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 +GE ++ N KRP +AF ++ E R K+ E+P L +++K+LG W +K Sbjct: 53 RGENVRE-SSQNHVKRPMNAFIVWSRERRRKVALENPKLQNSEISKQLGYEWKRLTDAEK 111 Query: 141 QP 142 +P Sbjct: 112 RP 113 >Q03255 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 229 Score = 38.7 bits (88), Expect = 0.008 Identities = 17/48 (35%), Positives = 28/48 (57%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ E R K+ E+P + D++K+LG W +K+P Sbjct: 55 KRPMNAFIVWSRERRRKVALENPKMKNSDISKQLGYEWKRLTDAEKRP 102 >Q27949 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 229 Score = 38.7 bits (88), Expect = 0.008 Identities = 17/48 (35%), Positives = 28/48 (57%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ E R K+ E+P + D++K+LG W +K+P Sbjct: 55 KRPMNAFIVWSRERRRKVALENPKMKNSDISKQLGYEWKRLTDAEKRP 102 >P54231 TRANSCRIPTION FACTOR SOX-2. Length = 320 Score = 38.7 bits (88), Expect = 0.008 Identities = 27/89 (30%), Positives = 42/89 (46%), Gaps = 3/89 (3%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P + + M+ AF V + + K + ++ SE SK+ WK +S EK F D Sbjct: 38 KNSPDRVKRPMN--AFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFID 95 Query: 62 MAKADKARYEREMKTY-IPPKGETKKKFK 89 AK +A + +E Y P+ +TK K Sbjct: 96 EAKRLRALHMKEHPDYKYRPRRKTKTLMK 124 Score = 37.1 bits (84), Expect = 0.025 Identities = 16/52 (30%), Positives = 30/52 (56%) Query: 91 PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 P+ KRP +AF ++ R K+ E+P + +++K+LG W + +K+P Sbjct: 41 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRP 92 >P48432 TRANSCRIPTION FACTOR SOX-2. Length = 318 Score = 38.7 bits (88), Expect = 0.008 Identities = 27/89 (30%), Positives = 42/89 (46%), Gaps = 3/89 (3%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P + + M+ AF V + + K + ++ SE SK+ WK +S EK F D Sbjct: 37 KNSPDRVKRPMN--AFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFID 94 Query: 62 MAKADKARYEREMKTY-IPPKGETKKKFK 89 AK +A + +E Y P+ +TK K Sbjct: 95 EAKRLRALHMKEHPDYKYRPRRKTKTLMK 123 Score = 37.1 bits (84), Expect = 0.025 Identities = 16/52 (30%), Positives = 30/52 (56%) Query: 91 PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 P+ KRP +AF ++ R K+ E+P + +++K+LG W + +K+P Sbjct: 40 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRP 91 >P48431;Q14537 TRANSCRIPTION FACTOR SOX-2. Length = 317 Score = 38.7 bits (88), Expect = 0.008 Identities = 27/89 (30%), Positives = 42/89 (46%), Gaps = 3/89 (3%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P + + M+ AF V + + K + ++ SE SK+ WK +S EK F D Sbjct: 35 KNSPDRVKRPMN--AFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFID 92 Query: 62 MAKADKARYEREMKTY-IPPKGETKKKFK 89 AK +A + +E Y P+ +TK K Sbjct: 93 EAKRLRALHMKEHPDYKYRPRRKTKTLMK 121 Score = 37.1 bits (84), Expect = 0.025 Identities = 16/52 (30%), Positives = 30/52 (56%) Query: 91 PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 P+ KRP +AF ++ R K+ E+P + +++K+LG W + +K+P Sbjct: 38 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRP 89 >P48430 TRANSCRIPTION FACTOR SOX-2. Length = 315 Score = 38.7 bits (88), Expect = 0.008 Identities = 27/89 (30%), Positives = 42/89 (46%), Gaps = 3/89 (3%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P + + M+ AF V + + K + ++ SE SK+ WK +S EK F D Sbjct: 33 KNSPDRVKRPMN--AFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFID 90 Query: 62 MAKADKARYEREMKTY-IPPKGETKKKFK 89 AK +A + +E Y P+ +TK K Sbjct: 91 EAKRLRALHMKEHPDYKYRPRRKTKTLMK 119 Score = 36.7 bits (83), Expect = 0.032 Identities = 16/52 (30%), Positives = 30/52 (56%) Query: 91 PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 P+ KRP +AF ++ R K+ E+P + +++K+LG W + +K+P Sbjct: 36 PDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRP 87 >P36981 MATING TYPE PROTEIN A-1 (MT A-1) (LOWER CASE "A"). Length = 382 Score = 38.7 bits (88), Expect = 0.008 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 9/60 (15%) Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E +KK K P RPP+A+ L+ ++ +I+ ++PGL +++ +G MW D+QP Sbjct: 109 EQQKKAKIP----RPPNAYILYRKDHHREIREQNPGLHNNEISVIVGNMWR-----DEQP 159 >O09141;O08518 TRANSCRIPTION FACTOR SOX-21 (TRANSCRIPTION FACTOR SOX-M) (FRAGMENT). Length = 533 Score = 38.3 bits (87), Expect = 0.011 Identities = 19/67 (28%), Positives = 32/67 (47%) Query: 76 TYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 135 T +P K KRP +AF ++ R K+ ++P L +++K LG++W Sbjct: 180 TLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 239 Query: 136 AADDKQP 142 DK+P Sbjct: 240 NESDKRP 246 >P47792 TRANSCRIPTION FACTOR SOX-19. Length = 319 Score = 38.3 bits (87), Expect = 0.011 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 AF V + + K + ++ SE SK+ WK ++ EK F D AK +A + +E Sbjct: 59 AFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYP 118 Query: 76 TY-IPPKGETKKKFKDPNAPKRPPSA 100 Y P+ + KD A K P SA Sbjct: 119 DYKYKPRRKQPVLKKDNPAAKYPLSA 144 Score = 37.1 bits (84), Expect = 0.025 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 24/96 (25%) Query: 71 EREMKTYIPP-----KGETK-KKFKDPNAPK------------------RPPSAFFLFCS 106 E +MK+ +PP +G T+ K++ DP + K RP +AF ++ Sbjct: 6 EHDMKSAVPPTHQSAQGMTQLKRWSDPRSAKPACQQQQQQSRDPMDKVKRPMNAFMVWSR 65 Query: 107 EYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 R K+ E+P + +++K+LG W +K+P Sbjct: 66 GQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRP 101 >Q03256 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 240 Score = 37.9 bits (86), Expect = 0.014 Identities = 17/48 (35%), Positives = 28/48 (57%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ E R K+ E+P L +++K+LG W +K+P Sbjct: 66 KRPMNAFIVWSRERRRKVALENPKLQNSEISKQLGYEWKRLTDAEKRP 113 >P51501 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 227 Score = 37.5 bits (85), Expect = 0.019 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 55 EKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKG 114 + GK + D + + + +T KG + N KRP +AF ++ + R K+ Sbjct: 27 DSGKSSSVIWTDNSSSKDQWQTGENSKGSVQ------NRVKRPMNAFIVWSRDQRRKMAV 80 Query: 115 EHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E+P + +++K+LG W +K P Sbjct: 81 ENPQMRNSEISKRLGYQWKLLTEAEKWP 108 Score = 29.0 bits (63), Expect = 7.2 Identities = 18/69 (26%), Positives = 30/69 (43%) Query: 9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKA 68 R K AF V + + K + + SE SK+ +WK ++ EK F A+ +A Sbjct: 59 RVKRPMNAFIVWSRDQRRKMAVENPQMRNSEISKRLGYQWKLLTEAEKWPFFQEAQKLQA 118 Query: 69 RYEREMKTY 77 + + Y Sbjct: 119 MHREKYPNY 127 >O18896 TRANSCRIPTION FACTOR SOX-9. Length = 509 Score = 37.5 bits (85), Expect = 0.019 Identities = 18/67 (26%), Positives = 33/67 (48%) Query: 76 TYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 135 T +P K+ KRP +AF ++ R K+ ++P L +++K LG++W Sbjct: 87 TLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 146 Query: 136 AADDKQP 142 +K+P Sbjct: 147 NESEKRP 153 >P48436 TRANSCRIPTION FACTOR SOX-9. Length = 509 Score = 37.5 bits (85), Expect = 0.019 Identities = 18/67 (26%), Positives = 33/67 (48%) Query: 76 TYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 135 T +P K+ KRP +AF ++ R K+ ++P L +++K LG++W Sbjct: 87 TLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 146 Query: 136 AADDKQP 142 +K+P Sbjct: 147 NESEKRP 153 >P48434 TRANSCRIPTION FACTOR SOX-9. Length = 494 Score = 37.5 bits (85), Expect = 0.019 Identities = 18/67 (26%), Positives = 33/67 (48%) Query: 76 TYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 135 T +P K+ KRP +AF ++ R K+ ++P L +++K LG++W Sbjct: 88 TLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 147 Query: 136 AADDKQP 142 +K+P Sbjct: 148 NESEKRP 154 >P40645 TRANSCRIPTION FACTOR SOX-6. Length = 827 Score = 37.5 bits (85), Expect = 0.019 Identities = 19/73 (26%), Positives = 32/73 (43%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXX 154 KRP +AF ++ + R KI P + +++K LG W + + +KQP Sbjct: 621 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIH 680 Query: 155 XXDIAAYRAKGKP 167 Y+ K +P Sbjct: 681 LEKYPNYKYKPRP 693 Score = 31.3 bits (69), Expect = 1.4 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK-FEDMAKA 65 +P K AF V E K ++ S SK RWK+MS +EK +E+ A+ Sbjct: 617 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 676 Query: 66 DKARYER 72 K E+ Sbjct: 677 SKIHLEK 683 >P53784 TRANSCRIPTION FACTOR SOX-3. Length = 375 Score = 37.5 bits (85), Expect = 0.019 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 G G + R K AF V + + K + ++ SE SK+ WK ++ EK F Sbjct: 60 GGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFI 119 Query: 61 DMAKADKARYEREMKTY-IPPKGETKKKFK 89 D AK +A + +E Y P+ +TK K Sbjct: 120 DEAKRLRAVHMKEYPDYKYRPRRKTKTLLK 149 Score = 34.0 bits (76), Expect = 0.21 Identities = 16/53 (30%), Positives = 29/53 (54%) Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 D + KRP +AF ++ R K+ E+P + +++K+LG W +K+P Sbjct: 65 DQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRP 117 >P41225;P35714 TRANSCRIPTION FACTOR SOX-3. Length = 443 Score = 37.5 bits (85), Expect = 0.019 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 G G + R K AF V + + K + ++ SE SK+ WK ++ EK F Sbjct: 130 GGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFI 189 Query: 61 DMAKADKARYEREMKTY-IPPKGETKKKFK 89 D AK +A + +E Y P+ +TK K Sbjct: 190 DEAKRLRAVHMKEYPDYKYRPRRKTKTLLK 219 Score = 34.0 bits (76), Expect = 0.21 Identities = 16/53 (30%), Positives = 29/53 (54%) Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 D + KRP +AF ++ R K+ E+P + +++K+LG W +K+P Sbjct: 135 DQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRP 187 >P48433 TRANSCRIPTION FACTOR SOX-3. Length = 312 Score = 37.1 bits (84), Expect = 0.025 Identities = 26/82 (31%), Positives = 38/82 (45%), Gaps = 1/82 (1%) Query: 9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKA 68 R K AF V + + K + ++ SE SK+ WK +S EK F D AK +A Sbjct: 45 RVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRA 104 Query: 69 RYEREMKTY-IPPKGETKKKFK 89 + +E Y P+ +TK K Sbjct: 105 VHMKEYPDYKYRPRRKTKTLLK 126 Score = 35.2 bits (79), Expect = 0.095 Identities = 16/53 (30%), Positives = 30/53 (56%) Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 D + KRP +AF ++ R K+ E+P + +++K+LG W + +K+P Sbjct: 42 DQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRP 94 >P10840 MATING-TYPE M-SPECIFIC POLYPEPTIDE MC. Length = 181 Score = 37.1 bits (84), Expect = 0.025 Identities = 15/43 (34%), Positives = 25/43 (57%) Query: 96 RPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138 RPP+AF L+ E + +P ++ V+K +GEMW N + + Sbjct: 105 RPPNAFILYRKEKHATLLKSNPSINNSQVSKLVGEMWRNESKE 147 Score = 29.0 bits (63), Expect = 7.2 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 7/74 (9%) Query: 18 FVQTCREEHK---KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 74 F+ +E+H K +P S+N S+ SK E W+ S + + ++ M++ KA++++ Sbjct: 110 FILYRKEKHATLLKSNP--SINNSQVSKLVGEMWRNESKEVRMRYFKMSEFYKAQHQKMY 167 Query: 75 K--TYIPPKGETKK 86 Y P K + K+ Sbjct: 168 PGYKYQPRKNKVKR 181 >P40649 SOX-12 PROTEIN. Length = 470 Score = 36.7 bits (83), Expect = 0.032 Identities = 20/76 (26%), Positives = 32/76 (41%) Query: 92 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXX 151 N KRP +AF ++ + R KI P + ++K LG W + + +KQP Sbjct: 293 NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNGEKQPYYEEQARLS 352 Query: 152 XXXXXDIAAYRAKGKP 167 Y+ K +P Sbjct: 353 RQHLERYPDYKYKPRP 368 Score = 28.6 bits (62), Expect = 9.4 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK-FEDMAKADKARYER 72 AF V E K ++ S SK RWK+MS EK +E+ A+ + ER Sbjct: 301 AFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNGEKQPYYEEQARLSRQHLER 358 >Q00417 T-CELL-SPECIFIC TRANSCRIPTION FACTOR 1 (TCF-1) (T-CELL FACTOR 1) Length = 303 Score = 36.4 bits (82), Expect = 0.042 Identities = 23/77 (29%), Positives = 38/77 (48%), Gaps = 3/77 (3%) Query: 64 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGD 123 K + Y+R +KT PK E K+ K P K+P +AF L+ E R K+ E Sbjct: 161 KQELQPYDRNLKTQAEPKAE--KEAKKP-VIKKPLNAFMLYMKEMRAKVIAECTLKESAA 217 Query: 124 VAKKLGEMWNNTAADDK 140 + + LG W+ + +++ Sbjct: 218 INQILGRRWHALSREEQ 234 >Q06945 TRANSCRIPTION FACTOR SOX-4. Length = 474 Score = 36.4 bits (82), Expect = 0.042 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 14/128 (10%) Query: 1 GKGDP----KKPRG--KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAK 54 GK D K P G K AF V + E K ++ +E SK+ +RWK + K Sbjct: 44 GKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLL--K 101 Query: 55 EKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKG 114 + K + +A++ R + M Y K +KK K NA +A + +P KG Sbjct: 102 DSDKIPFIREAERLRL-KHMADYPDYKYRPRKKVKSGNANSSSSAA-----ASSKPGEKG 155 Query: 115 EHPGLSIG 122 + G S G Sbjct: 156 DKVGGSGG 163 Score = 34.8 bits (78), Expect = 0.12 Identities = 16/48 (33%), Positives = 26/48 (53%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG+ W DK P Sbjct: 60 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIP 107 >P40637 SRY-RELATED PROTEIN AES1 (FRAGMENT). Length = 72 Score = 35.6 bits (80), Expect = 0.073 Identities = 16/48 (33%), Positives = 26/48 (53%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG+ W DK P Sbjct: 2 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKGSDKIP 49 >P40634 SRY-RELATED PROTEIN ADW2 (FRAGMENT). Length = 72 Score = 35.6 bits (80), Expect = 0.073 Identities = 18/68 (26%), Positives = 29/68 (42%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXX 154 KRP +AF ++ R KI + P + +++K+LG W +K P Sbjct: 2 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVKGAERLRLKH 61 Query: 155 XXDIAAYR 162 D A Y+ Sbjct: 62 MADYADYK 69 >Q61473;Q61472 TRANSCRIPTION FACTOR SOX-17. Length = 419 Score = 35.2 bits (79), Expect = 0.095 Identities = 15/59 (25%), Positives = 32/59 (53%) Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 T + K + +RP +AF ++ + R ++ ++P L +++K LG+ W +K+P Sbjct: 58 TSGRAKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRP 116 >P36395 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 208 Score = 35.2 bits (79), Expect = 0.095 Identities = 23/82 (28%), Positives = 38/82 (46%) Query: 9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKA 68 R K AF V + + K + ++ SE SK+ WK +S EK F D AK + Sbjct: 34 RVKRPMNAFMVWSQTQRRKVALQNPKMHNSEISKQLGVTWKLLSDSEKRPFIDEAKRLRD 93 Query: 69 RYEREMKTYIPPKGETKKKFKD 90 ++++ P+ +TK K+ Sbjct: 94 KHKQVSDYKYQPRRKTKSFLKN 115 Score = 34.4 bits (77), Expect = 0.16 Identities = 14/48 (29%), Positives = 28/48 (58%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R K+ ++P + +++K+LG W + +K+P Sbjct: 36 KRPMNAFMVWSQTQRRKVALQNPKMHNSEISKQLGVTWKLLSDSEKRP 83 >Q62563 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 355 Score = 34.8 bits (78), Expect = 0.12 Identities = 22/76 (28%), Positives = 35/76 (45%), Gaps = 5/76 (6%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G K+P AF V + E HK + S+ +E SK+ RWK+++ EK F Sbjct: 2 EGHVKRPMN-----AFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQ 56 Query: 62 MAKADKARYEREMKTY 77 A+ K + + Y Sbjct: 57 EAQRLKTLHREKYPNY 72 Score = 34.0 bits (76), Expect = 0.21 Identities = 14/48 (29%), Positives = 28/48 (58%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R K+ ++P + +++K+LG W + +K+P Sbjct: 6 KRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRP 53 >Q62565 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 311 Score = 34.8 bits (78), Expect = 0.12 Identities = 22/76 (28%), Positives = 35/76 (45%), Gaps = 5/76 (6%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G K+P AF V + E HK + S+ +E SK+ RWK+++ EK F Sbjct: 2 EGHVKRPMN-----AFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQ 56 Query: 62 MAKADKARYEREMKTY 77 A+ K + + Y Sbjct: 57 EAQRLKTLHREKYPNY 72 Score = 34.0 bits (76), Expect = 0.21 Identities = 14/48 (29%), Positives = 28/48 (58%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R K+ ++P + +++K+LG W + +K+P Sbjct: 6 KRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRP 53 >Q06831 TRANSCRIPTION FACTOR SOX-4. Length = 440 Score = 34.8 bits (78), Expect = 0.12 Identities = 16/48 (33%), Positives = 26/48 (53%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG+ W DK P Sbjct: 60 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIP 107 Score = 34.4 bits (77), Expect = 0.16 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 9/99 (9%) Query: 1 GKGDP----KKPRG--KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAK 54 GK D K P G K AF V + E K ++ +E SK+ +RWK + K Sbjct: 44 GKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLL--K 101 Query: 55 EKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNA 93 + K + +A++ R + M Y K +KK K NA Sbjct: 102 DSDKIPFIQEAERLRL-KHMADYPDYKYRPRKKVKSGNA 139 >P40639 SRY-RELATED PROTEIN AES4 (FRAGMENT). Length = 72 Score = 34.8 bits (78), Expect = 0.12 Identities = 16/48 (33%), Positives = 26/48 (53%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG+ W DK P Sbjct: 2 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIP 49 >Q12766 HYPOTHETICAL PROTEIN KIAA0194 (FRAGMENT). Length = 1435 Score = 34.4 bits (77), Expect = 0.16 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 79 PPKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 PPK KKK+K K+P SA+ L+ + K++ E P L ++ KK+ E W Sbjct: 171 PPK--KKKKYKIHGEKTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESW 223 Score = 31.3 bits (69), Expect = 1.4 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 5/62 (8%) Query: 6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 65 KKPR Y + + ++ P + +N KK SE W+ +S E+ + + AK Sbjct: 186 KKPRSAYLLYYYDIYLKVQQELPHLPQSEIN-----KKISESWRLLSVAERSYYLEKAKL 240 Query: 66 DK 67 +K Sbjct: 241 EK 242 >Q05738 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 395 Score = 34.4 bits (77), Expect = 0.16 Identities = 22/76 (28%), Positives = 35/76 (45%), Gaps = 5/76 (6%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G K+P AF V + E HK + S+ +E SK+ RWK+++ EK F Sbjct: 2 EGHVKRPMN-----AFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQ 56 Query: 62 MAKADKARYEREMKTY 77 A+ K + + Y Sbjct: 57 EAQRLKILHREKYPNY 72 Score = 34.0 bits (76), Expect = 0.21 Identities = 14/48 (29%), Positives = 28/48 (58%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R K+ ++P + +++K+LG W + +K+P Sbjct: 6 KRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRP 53 >Q05066 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 204 Score = 34.4 bits (77), Expect = 0.16 Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ + R K+ E+P + +++K+LG W +K P Sbjct: 61 KRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWP 108 >P48046 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 204 Score = 34.4 bits (77), Expect = 0.16 Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ + R K+ E+P + +++K+LG W +K P Sbjct: 61 KRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWP 108 >P35710 TRANSCRIPTION FACTOR SOX-5. Length = 392 Score = 34.4 bits (77), Expect = 0.16 Identities = 19/73 (26%), Positives = 30/73 (41%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXX 154 KRP +AF ++ + R KI P + +++K LG W +KQP Sbjct: 186 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQH 245 Query: 155 XXDIAAYRAKGKP 167 Y+ K +P Sbjct: 246 LEKYPDYKYKPRP 258 >P35711 TRANSCRIPTION FACTOR SOX-5. Length = 347 Score = 34.4 bits (77), Expect = 0.16 Identities = 19/73 (26%), Positives = 30/73 (41%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXX 154 KRP +AF ++ + R KI P + +++K LG W +KQP Sbjct: 141 KRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQH 200 Query: 155 XXDIAAYRAKGKP 167 Y+ K +P Sbjct: 201 LEKYPDYKYKPRP 213 >O15370 SOX-22 PROTEIN. Length = 315 Score = 34.0 bits (76), Expect = 0.21 Identities = 15/48 (31%), Positives = 25/48 (51%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG W +K P Sbjct: 41 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIP 88 Score = 32.5 bits (72), Expect = 0.63 Identities = 28/94 (29%), Positives = 41/94 (42%), Gaps = 5/94 (5%) Query: 6 KKPRG--KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 K P G K AF V + E K ++ +E SK+ RW+ + EK F + Sbjct: 34 KTPSGHIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPF--VR 91 Query: 64 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRP 97 +A++ R + M Y K +KK K A RP Sbjct: 92 EAERLRL-KHMADYPDYKYRPRKKSKGAPAKARP 124 >P43680 TRANSCRIPTION FACTOR SOX-18. Length = 377 Score = 34.0 bits (76), Expect = 0.21 Identities = 15/61 (24%), Positives = 32/61 (51%) Query: 82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 G +++ D +RP +AF ++ + R ++ ++P L ++K LG+ W +K+ Sbjct: 67 GRGERQTADELRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKR 126 Query: 142 P 142 P Sbjct: 127 P 127 >Q04889;O35178 TRANSCRIPTION FACTOR SOX-11. Length = 395 Score = 34.0 bits (76), Expect = 0.21 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXX 154 KRP +AF ++ R KI + P + +++K+LG+ W +K P Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAGRLRLKH 109 Query: 155 XXDIA--AYRAKGKP 167 D YR + KP Sbjct: 110 MADYPDYKYRPRKKP 124 Score = 30.5 bits (67), Expect = 2.4 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 AF V + E K ++ +E SK+ +RWK + EK F + +A + R + M Sbjct: 55 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPF--IREAGRLRL-KHMA 111 Query: 76 TYIPPKGETKKKFKDPNAPKRPPSA 100 Y K +KK K A K PSA Sbjct: 112 DYPDYKYRPRKKPKTDPAAK--PSA 134 >P35716 TRANSCRIPTION FACTOR SOX-11. Length = 441 Score = 34.0 bits (76), Expect = 0.21 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXX 154 KRP +AF ++ R KI + P + +++K+LG+ W +K P Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109 Query: 155 XXDIA--AYRAKGKP 167 D YR + KP Sbjct: 110 MADYPDYKYRPRKKP 124 Score = 32.1 bits (71), Expect = 0.83 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%) Query: 16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 AF V + E K ++ +E SK+ +RWK + EK F + +A++ R + M Sbjct: 55 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPF--IREAERLRL-KHMA 111 Query: 76 TYIPPKGETKKKFKDPNAPKRPPSA 100 Y K +KK PK PSA Sbjct: 112 DYPDYKYRPRKK------PKMDPSA 130 >P48435 TRANSCRIPTION FACTOR SOX-11. Length = 396 Score = 34.0 bits (76), Expect = 0.21 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPXXXXXXXXXXXX 154 KRP +AF ++ R KI + P + +++K+LG+ W +K P Sbjct: 50 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 109 Query: 155 XXDIA--AYRAKGKP 167 D YR + KP Sbjct: 110 MADYPDYKYRPRKKP 124 Score = 32.1 bits (71), Expect = 0.83 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%) Query: 16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 AF V + E K ++ +E SK+ +RWK + EK F + +A++ R + M Sbjct: 55 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPF--IREAERLRL-KHMA 111 Query: 76 TYIPPKGETKKKFKDPNAPKRPPSA 100 Y K +KK PK PSA Sbjct: 112 DYPDYKYRPRKK------PKMDPSA 130 >P36393 SEX-DETERMINING REGION Y PROTEIN (TESTIS-DETERMINING FACTOR). Length = 208 Score = 34.0 bits (76), Expect = 0.21 Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ + R K+ E+P + +++K LG W +K+P Sbjct: 63 KRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAEKRP 110 >P40655 SRY-RELATED PROTEIN LG28 (FRAGMENT). Length = 71 Score = 34.0 bits (76), Expect = 0.21 Identities = 15/48 (31%), Positives = 25/48 (51%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG W +K P Sbjct: 2 KRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIP 49 >P40638 SRY-RELATED PROTEIN AES2 (FRAGMENT). Length = 72 Score = 34.0 bits (76), Expect = 0.21 Identities = 16/48 (33%), Positives = 25/48 (51%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF + R KI + P + +++K+LG+ W DK P Sbjct: 2 KRPMNAFMVGSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKGSDKIP 49 >P40636 SRY-RELATED PROTEIN ADW5 (FRAGMENT). Length = 72 Score = 34.0 bits (76), Expect = 0.21 Identities = 15/48 (31%), Positives = 25/48 (51%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG W +K P Sbjct: 2 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIP 49 >P40635 SRY-RELATED PROTEIN ADW4 (FRAGMENT). Length = 72 Score = 34.0 bits (76), Expect = 0.21 Identities = 15/48 (31%), Positives = 25/48 (51%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG W +K P Sbjct: 2 KRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWELLQDSEKIP 49 >P40651 SRY-RELATED PROTEIN MG42 (FRAGMENT). Length = 72 Score = 33.6 bits (75), Expect = 0.28 Identities = 15/48 (31%), Positives = 25/48 (51%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG W +K P Sbjct: 2 KRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLGRPWQLLQDSEKIP 49 >P40654 SRY-RELATED PROTEIN LG27 (FRAGMENT). Length = 71 Score = 33.6 bits (75), Expect = 0.28 Identities = 14/48 (29%), Positives = 25/48 (51%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++K+LG W ++ P Sbjct: 2 KRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLGRRWQLLQDSERYP 49 >P35717 SOX-12 PROTEIN (FRAGMENT). Length = 59 Score = 33.2 bits (74), Expect = 0.37 Identities = 16/55 (29%), Positives = 29/55 (52%) Query: 19 VQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYERE 73 V + + + H + ++ SE SK+ +WK + EK F + AK +AR+ R+ Sbjct: 2 VWSSAQRRQMAHENPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRARHLRD 56 >P25042 ROX1 REPRESSOR (HYPOXIC FUNCTION REPRESSOR) (HEME-DEPENDENT REPRESSION Length = 368 Score = 33.2 bits (74), Expect = 0.37 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 38 SEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKK 87 S SK +WK + ++K +E++A+ +K +ER+ Y P ++KKK Sbjct: 43 SNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEYKYKPVRKSKKK 93 >P40665 SRY-RELATED PROTEIN CH1 (FRAGMENT). Length = 54 Score = 33.2 bits (74), Expect = 0.37 Identities = 16/40 (40%), Positives = 21/40 (52%) Query: 38 SEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 77 SE SK+ WK +S EK F D AK +A + +E Y Sbjct: 11 SEISKRLGAEWKQLSEAEKRPFIDEAKRHRAMHMKEYPDY 50 >Q08696 AXONEME-ASSOCIATED PROTEIN MST101(2). Length = 1391 Score = 32.8 bits (73), Expect = 0.48 Identities = 31/91 (34%), Positives = 41/91 (44%), Gaps = 3/91 (3%) Query: 42 KKCSERWKTMSAKEKGKFEDMAKADKARYEREM--KTYIPPKGETKKKFKDPNAPKRPPS 99 KKC E K +A EK K ++ AK +K E++ KT K E +KK + A KR + Sbjct: 765 KKCRELAKKKAA-EKKKCKEAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEA 823 Query: 100 AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGE 130 A C + K K E AKK E Sbjct: 824 AEKKKCEKAAKKRKEEAEKKKCEKTAKKRKE 854 Score = 30.5 bits (67), Expect = 2.4 Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 9/128 (7%) Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGKFEDMAKA 65 K K A + C + KK+ +A KKC + K A EK K E AK Sbjct: 782 KEAAKKEKEAAEKKKCEKTAKKRKEEAE------KKKCEKTAKKRKEAAEKKKCEKAAKK 835 Query: 66 DKARYEREM--KTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGD 123 K E++ KT K +KK + A KR +A C + K K + Sbjct: 836 RKEEAEKKKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKKCAE 895 Query: 124 VAKKLGEM 131 AKK E+ Sbjct: 896 AAKKEKEL 903 >Q02991 MATING-TYPE PROTEIN MAT-2. Length = 343 Score = 32.8 bits (73), Expect = 0.48 Identities = 12/47 (25%), Positives = 26/47 (54%) Query: 96 RPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 RP + + +F +K E P L+I +++ + +W+N + + K+P Sbjct: 133 RPMNCWIIFRDAMHKHLKAEFPHLTIQEISTRCSHIWHNLSPEAKKP 179 >P40652 SRY-RELATED PROTEIN MG43 (FRAGMENT). Length = 72 Score = 32.5 bits (72), Expect = 0.63 Identities = 14/48 (29%), Positives = 25/48 (51%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ R KI + P + +++++LG W +K P Sbjct: 2 KRPMNAFMVWSQNERRKIMDQWPDMHNAEISERLGRRWQLLQDSEKIP 49 >P40670 SRY-RELATED PROTEIN CH31 (FRAGMENT). Length = 54 Score = 32.5 bits (72), Expect = 0.63 Identities = 16/40 (40%), Positives = 21/40 (52%) Query: 38 SEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 77 SE SK+ WK +S EK F D AK +A + +E Y Sbjct: 11 SEISKRLGAEWKLLSEAEKRPFIDEAKRLRAMHMKEYPNY 50 >P40642 SRY-RELATED PROTEIN AMA2 (FRAGMENT). Length = 54 Score = 32.5 bits (72), Expect = 0.63 Identities = 16/40 (40%), Positives = 21/40 (52%) Query: 38 SEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 77 SE SK+ WK +S EK F D AK +A + +E Y Sbjct: 11 SEISKRLGAEWKLLSEAEKRPFIDEAKRLRAMHMKEYPNY 50 >P40657 SOX-15 PROTEIN (FRAGMENT). Length = 54 Score = 31.3 bits (69), Expect = 1.4 Identities = 12/34 (35%), Positives = 20/34 (58%) Query: 109 RPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 R K+ E+P L D++K LG+ W + D++P Sbjct: 5 RKKLADENPDLHNADLSKMLGKKWRSLTPQDRRP 38 >Q04892 SOX-14 PROTEIN (FRAGMENT). Length = 56 Score = 31.3 bits (69), Expect = 1.4 Identities = 15/50 (30%), Positives = 26/50 (52%) Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYERE 73 + K + ++ SE SK+ WK +S EK + D AK +A++ +E Sbjct: 7 QRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKE 56 >Q00956 COAT PROTEIN. Length = 488 Score = 31.3 bits (69), Expect = 1.4 Identities = 28/79 (35%), Positives = 38/79 (47%), Gaps = 7/79 (8%) Query: 14 SYAFFVQTCREEHKKKHPDASVN---FSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY 70 S F + C+EE K D S N +F+KKC + SA+ K K K RY Sbjct: 311 SLGFERKICKEELSKIR-DLSKNEKKLKKFNKKCCSI-EEASAEYGCKKTSTKKYHKKRY 368 Query: 71 EREMKTYIPPKGETKKKFK 89 +++ K Y P K KKKF+ Sbjct: 369 KKKYKAYKPYK--KKKKFR 385 >P40640 SRY-RELATED PROTEIN AES6 (FRAGMENT). Length = 72 Score = 31.3 bits (69), Expect = 1.4 Identities = 14/48 (29%), Positives = 24/48 (49%) Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 KRP +AF ++ KI + P + +++K+ G+ W DK P Sbjct: 2 KRPMNAFMVWSQSRAGKIMEQSPDMHNAEISKRRGKRWKLLKDSDKIP 49 >P40656 SOX-14 PROTEIN (FRAGMENT). Length = 54 Score = 30.9 bits (68), Expect = 1.9 Identities = 14/34 (41%), Positives = 19/34 (55%) Query: 109 RPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 R KI P L +++K+LG W + DDKQP Sbjct: 5 RRKICERTPDLHNAEISKELGRRWQLLSKDDKQP 38 >P35715 SOX-10 PROTEIN (FRAGMENT). Length = 54 Score = 30.9 bits (68), Expect = 1.9 Identities = 15/50 (30%), Positives = 25/50 (50%) Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYERE 73 + K + ++ SE SK+ WK ++ EK F D AK +A + +E Sbjct: 4 QRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKE 53 >Q09202 HYPOTHETICAL 25.9 KD PROTEIN AH6.3 IN CHROMOSOME II. Length = 230 Score = 30.1 bits (66), Expect = 3.2 Identities = 20/73 (27%), Positives = 36/73 (48%), Gaps = 4/73 (5%) Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 E+ KKK + V S+ ER ++ +EK ++ + +K + + + KT K + Sbjct: 107 EKSKKKKTEEKV----MSEDKPERPDKLTEEEKPDAKEKKEIEKEKTKEKEKTKEKEKTQ 162 Query: 84 TKKKFKDPNAPKR 96 K+K KD PK+ Sbjct: 163 EKEKSKDETVPKQ 175 >P09208;Q24089;Q24023 INSULIN-LIKE RECEPTOR PRECURSOR (EC 2.7.1.112). Length = 2146 Score = 30.1 bits (66), Expect = 3.2 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 5/79 (6%) Query: 15 YAFFVQTCREEHKKKHPDASVNFSEFSKK-CSERWKTMSAKEKGKFEDMAKADKARYERE 73 YA FV CREE P + + F K CS+ ++ KF D+ K E Sbjct: 1158 YAIFVVACREE----IPSEKLRDTSFKKSLCSDYDTVFQTTKRKKFADIVMDLKVDLEHA 1213 Query: 74 MKTYIPPKGETKKKFKDPN 92 T P + DPN Sbjct: 1214 NNTESPATFSLGRHQLDPN 1232 >Q11102 HYPOTHETICAL 131.5 KD PROTEIN C02F12.7 IN CHROMOSOME X. Length = 1130 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/82 (21%), Positives = 42/82 (50%), Gaps = 6/82 (7%) Query: 2 KGDPKKPRGKMSSYAFFVQTCRE---EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGK 58 + + +P G+ + +QT E E++++ + FSE+ ++ +ER + + A+ GK Sbjct: 114 RNNSPQPAGRETELKRKIQTLEETVAEYERQKYNVMGTFSEYRERVAERERKLEAEYSGK 173 Query: 59 FEDMAK---ADKARYEREMKTY 77 +++ K +E MK++ Sbjct: 174 IIALSEEVLGAKKDFEARMKSF 195 >P19375 HISTONE H1, EARLY EMBRYONIC. Length = 205 Score = 29.0 bits (63), Expect = 7.2 Identities = 32/107 (29%), Positives = 49/107 (44%), Gaps = 20/107 (18%) Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS----AKEKG 57 KG + +GK +S +F V A SE +KK E+ K ++ AKEKG Sbjct: 72 KGKLVQTKGKGASGSFKVNV---------QAAKAQASEKAKKEKEKAKLLAQREKAKEKG 122 Query: 58 KFEDMAKADKARYE------REMKTYIPPKGETKKKFKDP-NAPKRP 97 E+ A+ +R + ++ K + E K+K K P APK+P Sbjct: 123 CSEEGETAEGSRPKKVKAAPKKAKKPVKKTTEKKEKKKTPKKAPKKP 169 Database: sprot.fas Posted date: May 18, 1998 10:04 AM Number of letters in database: 26,335,942 Number of sequences in database: 72,615 Lambda K H 0.313 0.131 0.397 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9176623 Number of Sequences: 72615 Number of extensions: 370731 Number of successful extensions: 1257 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 880 Number of HSP's gapped (non-prelim): 291 length of query: 214 length of database: 26,335,942 effective HSP length: 50 effective length of query: 164 effective length of database: 22,705,192 effective search space: 3723651488 effective search space used: 3723651488 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 42 (21.9 bits) S2: 62 (28.6 bits)